Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 2.7e-99 367.1 383 100.0
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 4.1e-92 343.2 170 100.0
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 2.7e-59 234.2 257 76.7
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 2.0e-46 191.4 172 62.2
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 5.4e-44 183.3 260 66.2
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.7e-42 178.3 158 63.3
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 2.8e-40 171.0 257 65.8
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 5.3e-39 166.8 173 59.5
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.5e-38 165.2 262 67.9
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 9.9e-38 162.5 171 53.8
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 2.2e-37 161.4 175 55.4
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.1e-36 159.1 258 60.9
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.1e-36 159.1 171 52.6
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 5.5e-36 156.8 169 55.0
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 5.5e-36 156.8 175 52.6
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 7.1e-36 156.4 264 65.2
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 9.3e-36 156.0 257 62.6
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 4.6e-35 153.7 169 53.8
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 4.6e-35 153.7 169 53.8
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 6.0e-35 153.3 172 54.1
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.3e-34 152.1 173 52.0
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.8e-34 151.8 258 62.8
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 8.7e-34 149.4 261 62.1
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 4.3e-33 147.1 261 64.0
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 9.6e-33 146.0 173 52.0
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 1.3e-32 145.6 178 48.3
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 3.7e-32 144.1 257 59.5
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 1.8e-31 141.7 257 60.3
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 2.4e-31 141.4 257 61.1
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 2.4e-31 141.4 258 61.6
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 5.3e-31 140.2 172 47.1
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 6.9e-31 139.8 170 47.6
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 2.6e-30 137.9 174 47.1
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 7.6e-30 136.3 264 54.5
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.4e-28 132.1 181 45.9
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 3.2e-28 131.0 170 45.9
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 3.2e-28 131.0 257 61.1
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 4.2e-28 130.6 222 55.0
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 7.1e-28 129.8 280 58.2
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 9.3e-28 129.4 172 43.0
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 1.2e-27 129.0 249 63.1
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 5.1e-26 123.6 259 56.4
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 5.1e-26 123.6 285 56.5
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 5.1e-26 123.6 285 56.5
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 6.7e-26 123.2 172 46.5
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.5e-25 122.1 213 54.5
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.5e-25 122.1 173 45.7
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 1.3e-24 119.0 262 61.1
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 1.6e-24 118.6 265 61.5
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.6e-24 118.6 259 61.0
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 2.8e-24 117.9 164 44.5
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.7e-24 117.5 170 45.3
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.8e-24 117.1 161 46.0
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 6.3e-24 116.7 257 59.9
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.1e-23 115.9 261 59.8
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 4.1e-23 114.0 258 58.5
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 6.9e-23 113.2 258 58.5
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 6.9e-23 113.2 167 43.1
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.5e-22 112.1 163 44.2
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.5e-22 112.1 259 57.1
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 2.6e-22 111.3 170 42.9
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 7.6e-22 109.8 144 84.7
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 3.8e-21 107.5 214 65.0
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 5.0e-21 107.1 188 74.5
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 1.1e-20 105.9 260 60.0
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 3.2e-20 104.4 258 57.8
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 5.5e-20 103.6 258 55.0
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 7.2e-20 103.2 258 57.4
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 1.2e-19 102.4 258 55.4
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 1.6e-19 102.1 174 37.4
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.6e-19 102.1 167 76.0
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 1.6e-19 102.1 172 40.7
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 1.6e-19 102.1 171 39.2
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.7e-19 101.3 261 58.2
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 2.7e-19 101.3 258 55.0
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 2.7e-19 101.3 257 57.2
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 2.3e-18 98.2 207 67.1
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 3.0e-18 97.8 258 55.8
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.5e-17 95.5 178 70.8
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.5e-17 95.5 131 93.9
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 9.7e-17 92.8 193 68.4
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 2.2e-16 91.7 170 38.8
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 2.8e-16 91.3 257 54.1
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 3.7e-16 90.9 167 38.9
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 6.3e-16 90.1 257 54.1
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 6.3e-16 90.1 135 43.7
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.4e-15 89.0 257 55.3
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 5.3e-15 87.0 220 60.9
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.7e-13 82.0 130 40.8
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.7e-13 82.0 96 52.1
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 3.8e-13 80.9 136 78.7
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 3.8e-13 80.9 166 37.3
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 6.5e-13 80.1 186 59.1
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 5.5e-12 77.0 99 46.5
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 7.2e-12 76.6 140 79.3
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 7.2e-12 76.6 108 45.4
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.2e-11 75.9 108 43.5
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.1e-11 75.1 99 44.4
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.7e-11 74.7 105 45.7
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 1.8e-10 72.0 167 33.5
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 3.0e-10 71.2 99 43.4
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 5.1e-10 70.5 98 44.9
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 1.1e-09 69.3 167 34.7
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 9.7e-09 66.2 167 33.5
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.3e-08 65.9 125 37.6
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.3e-08 65.9 125 37.6
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 1.7e-08 65.5 171 32.2
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 5.3e-07 60.5 109 76.1
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 2.0e-06 58.5 74 70.3
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 3.4e-06 57.8 48 50.0
TPR.G12357 Trifolium pratense HOM05D006739 ORTHO05D008402 7.7e-06 56.6 80 36.2


User provided reference genes

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