Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.2e-117 423.7 209 100.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.9e-74 282.0 217 69.1
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.8e-71 273.1 201 69.7
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 7.1e-44 181.4 96 84.4
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.2e-43 180.6 162 64.8
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.8e-43 177.9 96 83.3
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.0e-34 151.0 98 76.5
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.0e-34 151.0 98 76.5
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 4.0e-31 139.0 135 60.7
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 6.4e-29 131.7 128 60.9
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 6.7e-26 121.7 133 55.6
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.9e-25 120.2 185 39.5
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-20 104.0 201 33.8
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 7.1e-20 101.7 216 31.9
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-19 100.9 201 33.3
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 4.6e-19 99.0 220 30.5
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 7.9e-19 98.2 218 35.3
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-18 96.3 172 36.6
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 3.0e-18 96.3 245 30.2
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 3.0e-18 96.3 240 26.7
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 3.0e-18 96.3 202 31.2
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.1e-18 95.5 197 32.0
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 5.1e-18 95.5 254 26.4
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.7e-18 94.7 180 35.0
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 1.5e-17 94.0 85 51.8
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.9e-17 93.6 276 27.9
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.3e-17 92.4 216 30.1
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 9.6e-17 91.3 199 30.2
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.6e-16 90.5 236 29.7
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 4.8e-16 89.0 184 32.6
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 6.2e-16 88.6 193 31.1
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.1e-15 87.8 213 29.1
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-15 87.4 174 33.3
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.8e-15 87.0 189 32.3
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 4.0e-15 85.9 126 42.9
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 5.3e-15 85.5 82 46.3
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 6.9e-15 85.1 198 28.3
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.0e-15 84.7 161 34.2
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 2.0e-14 83.6 82 47.6
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-14 83.2 199 29.6
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-14 82.8 184 32.1
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 3.4e-14 82.8 158 33.5
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 3.4e-14 82.8 285 27.0
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.8e-14 82.0 215 28.4
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.8e-14 82.0 73 52.1
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.6e-14 81.6 75 52.0
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 7.6e-14 81.6 82 41.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 1.3e-13 80.9 216 27.8
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-13 80.9 198 29.3
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.7e-13 80.5 82 45.1
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-13 80.1 170 31.2
CSS0033653 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 2.9e-13 79.7 97 47.4
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 2.9e-13 79.7 215 26.5
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.0e-13 79.0 108 39.8
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.5e-13 78.6 161 32.3
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 6.5e-13 78.6 237 27.4
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 6.5e-13 78.6 121 38.0
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 1.4e-12 77.4 206 28.6
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 1.4e-12 77.4 122 36.9
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 4.2e-12 75.9 75 45.3
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 5.5e-12 75.5 80 42.5
CSS0018917 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 7.1e-12 75.1 105 44.8
CSS0036287 Camellia sinensis var. sinensis HOM05D034359 ORTHO05D003768 7.1e-12 75.1 105 44.8
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 9.3e-12 74.7 64 48.4
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 9.3e-12 74.7 74 45.9
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-11 74.3 80 46.2
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-11 73.9 77 44.2
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-11 73.9 72 48.6
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-11 73.6 120 35.8
RcHm_v2.0_Chr1g0313071 Rosa chinensis HOM05D009091 ORTHO05D003768 2.1e-11 73.6 74 48.6
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-11 73.2 70 51.4
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.7e-11 73.2 205 30.2
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.6e-11 72.4 178 30.9
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 6.1e-11 72.0 162 30.2
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 6.1e-11 72.0 227 28.2
RcHm_v2.0_Chr1g0318841 Rosa chinensis HOM05D009091 ORTHO05D003768 6.1e-11 72.0 74 47.3
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 7.9e-11 71.6 74 43.2
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.9e-11 71.6 75 44.0
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 7.9e-11 71.6 121 36.4
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 1.0e-10 71.2 199 29.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.3e-10 70.9 61 45.9
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 1.3e-10 70.9 80 40.0
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-10 70.9 81 42.0
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 2.3e-10 70.1 194 28.9
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.7e-10 68.6 69 49.3
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.3e-09 66.2 157 30.6
RcHm_v2.0_Chr6g0280321 Rosa chinensis HOM05D009091 ORTHO05D003768 3.3e-09 66.2 66 43.9
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 4.3e-09 65.9 143 32.9
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.7e-09 65.5 136 34.6
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 7.4e-09 65.1 72 38.9
PSO675G1909 Papaver somniferum HOM05D008526 ORTHO05D010380 9.7e-09 64.7 82 39.0
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-08 63.5 64 51.6
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 4.8e-08 62.4 59 45.8
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 8.2e-08 61.6 76 39.5
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-07 60.8 133 31.6
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 4.1e-07 59.3 210 24.8
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 1.2e-06 57.8 84 38.1
BolC2t10485H Brassica oleracea HOM05D007314 ORTHO05D003768 1.5e-06 57.4 81 34.6
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 1.5e-06 57.4 55 47.3
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 1.5e-06 57.4 118 33.9
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 7.7e-06 55.1 214 23.4


User provided reference genes

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