Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 7.4e-175 617.1 306 100.0
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.4e-173 612.1 306 99.0
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 8.2e-158 560.5 306 90.8
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 2.9e-155 552.0 302 88.1
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 8.5e-155 550.4 302 87.7
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 8.5e-155 550.4 302 88.1
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.4e-154 549.7 325 83.7
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 4.2e-154 548.1 302 88.1
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 9.4e-154 547.0 301 87.4
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.2e-153 546.6 302 87.4
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 6.1e-153 544.3 306 84.3
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 8.0e-153 543.9 302 86.1
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 2.3e-152 542.3 302 85.8
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 2.3e-152 542.3 302 85.1
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 8.8e-152 540.4 301 86.0
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 1.5e-151 539.7 303 85.8
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 3.3e-151 538.5 302 86.4
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 3.3e-151 538.5 302 85.8
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 1.3e-150 536.6 301 85.7
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 1.7e-150 536.2 305 83.9
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 2.2e-150 535.8 301 85.4
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 2.8e-150 535.4 302 84.4
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 6.3e-150 534.3 305 84.3
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 8.2e-150 533.9 311 83.3
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 1.1e-149 533.5 301 85.0
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 1.4e-149 533.1 302 84.8
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 1.8e-149 532.7 306 82.4
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 2.4e-149 532.3 302 84.1
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 2.4e-149 532.3 303 84.2
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 5.3e-149 531.2 302 83.8
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 5.3e-149 531.2 302 84.4
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 7.0e-149 530.8 302 84.1
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 9.1e-149 530.4 302 83.8
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 1.6e-148 529.6 305 84.6
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 2.6e-148 528.9 301 84.4
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 7.7e-148 527.3 301 84.1
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 1.0e-147 526.9 302 84.1
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 1.7e-147 526.2 301 83.1
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 1.7e-147 526.2 302 84.4
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 2.2e-147 525.8 302 82.1
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 2.9e-147 525.4 301 84.1
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 8.5e-147 523.9 301 83.1
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 8.5e-147 523.9 302 82.8
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 1.9e-146 522.7 342 75.7
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 2.5e-146 522.3 301 83.1
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 2.5e-146 522.3 301 83.1
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 3.2e-146 521.9 301 83.1
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 5.5e-146 521.2 301 82.7
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 9.4e-146 520.4 304 81.2
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 1.2e-145 520.0 301 82.4
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 1.6e-145 519.6 302 82.1
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 4.7e-145 518.1 301 81.1
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 4.7e-145 518.1 302 82.1
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 4.7e-145 518.1 302 81.8
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 6.1e-145 517.7 302 81.5
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 6.1e-145 517.7 302 81.5
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 1.0e-144 516.9 302 81.8
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 2.3e-144 515.8 301 81.7
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 5.2e-144 514.6 304 80.6
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 6.7e-144 514.2 302 80.8
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 2.0e-143 512.7 302 80.5
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 3.3e-143 511.9 302 80.5
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 4.4e-143 511.5 302 80.5
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 5.7e-143 511.1 302 81.1
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 7.5e-143 510.8 305 82.0
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 9.7e-143 510.4 302 80.8
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 1.7e-142 509.6 302 81.1
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 2.8e-142 508.8 302 80.5
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 4.8e-142 508.1 302 80.5
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 4.8e-142 508.1 302 80.5
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 1.1e-141 506.9 348 75.0
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 5.3e-141 504.6 302 79.8
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 2.7e-140 502.3 303 81.5
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 1.7e-139 499.6 302 79.5
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 3.2e-138 495.4 304 78.3
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 2.7e-137 492.3 336 72.9
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 4.4e-135 485.0 270 87.4
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 9.8e-135 483.8 301 75.4
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 2.8e-134 482.3 270 87.0
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 5.4e-133 478.0 301 76.1
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 1.1e-130 470.3 280 78.6
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 1.0e-128 463.8 302 75.2
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 1.2e-124 450.3 302 72.8
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.9e-123 445.7 253 84.2
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 1.9e-122 443.0 308 72.4
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 8.0e-121 437.6 252 82.9
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 8.9e-120 434.1 302 66.6
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.6e-119 432.6 302 64.9
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.6e-119 432.6 302 64.9
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 5.4e-117 424.9 302 65.6
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 2.0e-116 422.9 277 73.3
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 5.0e-115 418.3 306 69.0
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 1.7e-107 393.3 281 69.0
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 9.5e-106 387.5 223 84.3
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 2.8e-97 359.4 200 87.5
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 7.1e-93 344.7 306 54.2
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 2.1e-92 343.2 302 53.3
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 3.1e-88 329.3 259 63.7
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 4.0e-88 328.9 184 85.9
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 1.2e-84 317.4 189 81.5
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.7e-83 313.5 307 56.4
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 1.6e-81 307.0 226 69.5
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 1.3e-78 297.4 311 48.9
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 2.9e-78 296.2 241 59.3
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 1.9e-69 266.9 205 65.9
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 4.0e-64 249.2 199 65.8
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.1e-61 238.4 124 86.3
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.1e-61 238.4 124 86.3
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 1.0e-54 218.0 124 78.2
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 2.9e-54 216.5 124 77.4
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 3.3e-50 203.0 182 61.5
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 6.9e-48 195.3 137 70.8
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 4.5e-39 166.0 103 68.9
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 1.7e-38 164.1 302 36.8
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 1.7e-38 164.1 307 32.6
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 2.0e-34 150.6 79 88.6
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 2.6e-34 150.2 133 61.7
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 7.4e-34 148.7 144 56.2
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 1.8e-32 144.1 102 69.6
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 6.5e-30 135.6 117 62.4
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 4.2e-29 132.9 181 44.2
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 7.5e-26 122.1 102 62.7
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 1.8e-24 117.5 66 78.8
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 1.6e-23 114.4 170 42.9
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 1.3e-22 111.3 114 54.4
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 9.4e-21 105.1 181 38.7
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 1.8e-19 100.9 83 62.7
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 7.7e-15 85.5 48 83.3
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 2.8e-12 77.0 64 59.4
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 4.1e-08 63.2 58 55.2
Lj1g0008117 Lotus japonicus HOM05D001625 ORTHO05D008114 5.0e-06 56.2 222 26.1


User provided reference genes

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