Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033671 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.3e-145 517.7 265 100.0
CSS0046198 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.7e-82 310.1 199 85.4
CSS0048757 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.2e-69 265.0 220 68.6
CSS0033959 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.3e-58 230.7 201 69.2
CSS0047827 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.5e-56 222.6 197 67.5
Rhsim05G0015700 Rhododendron simsii HOM05D000034 ORTHO05D000277 5.8e-27 125.6 204 42.6
vmacro18938 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 3.8e-26 122.9 197 41.6
Rhsim03G0059900 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.1e-25 121.3 199 43.2
Rhsim01G0279200 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.2e-25 119.8 199 42.7
vmacro19514 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.1e-16 90.5 198 35.4
Hma1.2p1_2091F.1_g313856 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.7e-13 80.9 197 32.0
Hma1.2p1_1104F.1_g257520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-13 80.1 204 33.8
Dinv04284 Davidia involucrata HOM05D000034 ORTHO05D000277 4.8e-13 79.3 195 30.3
Dinv40251 Davidia involucrata HOM05D000034 ORTHO05D000277 4.8e-13 79.3 195 30.3
Hma1.2p1_0529F.1_g173280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-13 79.0 204 31.9
Hma1.2p1_0386F.1_g141750 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.5e-11 74.3 204 30.9
Hma1.2p1_0170F.1_g074960 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.6e-11 73.6 204 31.9
Dinv07088 Davidia involucrata HOM05D000034 ORTHO05D000277 3.4e-11 73.2 219 28.8
Hma1.2p1_0744F.1_g211850 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 5.9e-11 72.4 200 32.5
Hma1.2p1_2091F.1_g313860 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 5.9e-11 72.4 204 30.4
Hma1.2p1_1277F.1_g272250 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.7e-10 70.9 204 30.9
Hma1.2p1_2109F.1_g314220 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.9e-10 70.1 204 30.9
Lsat_1_v5_gn_7_34221 Lactuca sativa HOM05D000034 ORTHO05D000277 8.5e-10 68.6 50 58.0
Migut.O00810 Erythranthe guttata HOM05D000034 ORTHO05D000277 2.5e-09 67.0 208 28.8
Hma1.2p1_1009F.1_g247290 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 3.2e-09 66.6 194 29.9
COL.COLO4_21831 Corchorus olitorius HOM05D000034 ORTHO05D000277 4.2e-09 66.2 51 51.0
Thecc.09G268100 Theobroma cacao HOM05D000034 ORTHO05D000277 9.4e-09 65.1 49 51.0
Atru.chr12.1422 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-08 63.9 49 57.1
Atru.chr4.1088 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-08 63.9 49 57.1
Atru.chr6.616 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-08 63.9 49 57.1
COL.COLO4_03888 Corchorus olitorius HOM05D000034 ORTHO05D000277 2.1e-08 63.9 48 50.0
Thecc.07G163000 Theobroma cacao HOM05D000034 ORTHO05D000277 2.1e-08 63.9 48 58.3
SGA_v2.0_scaffold122G33229 Striga asiatica HOM05D000034 ORTHO05D000277 2.7e-08 63.5 49 59.2
SGA_v2.0_scaffold17G08100 Striga asiatica HOM05D000034 ORTHO05D000277 2.7e-08 63.5 49 59.2
SGA_v2.0_scaffold283G47003 Striga asiatica HOM05D000034 ORTHO05D000277 2.7e-08 63.5 49 59.2
SGA_v2.0_scaffold4699G54522 Striga asiatica HOM05D000034 ORTHO05D000277 2.7e-08 63.5 49 59.2
SGA_v2.0_scaffold32G13267 Striga asiatica HOM05D000034 ORTHO05D000277 4.7e-08 62.8 49 57.1
Ciclev10006900m.g Citrus clementina HOM05D000034 ORTHO05D000277 6.1e-08 62.4 56 50.0
Atru.chr1.1500 Acer truncatum HOM05D000034 ORTHO05D000037 7.9e-08 62.0 48 56.2
SGA_v2.0_scaffold84G26487 Striga asiatica HOM05D000034 ORTHO05D000277 7.9e-08 62.0 55 50.9
Thecc.01G257300 Theobroma cacao HOM05D000034 ORTHO05D000277 7.9e-08 62.0 49 51.0
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 1.4e-07 61.2 74 36.5
Migut.N00931 Erythranthe guttata HOM05D000034 ORTHO05D000277 1.8e-07 60.8 63 44.4
Gorai.013G143900 Gossypium raimondii HOM05D000034 ORTHO05D000277 3.0e-07 60.1 50 52.0
Lsat_1_v5_gn_7_30480 Lactuca sativa HOM05D000034 ORTHO05D000277 3.0e-07 60.1 50 52.0
SGA_v2.0_scaffold177G39459 Striga asiatica HOM05D000034 ORTHO05D000277 3.0e-07 60.1 49 55.1
CANSAT80G2066 Cannabis sativa HOM05D000034 ORTHO05D000277 3.9e-07 59.7 74 40.5
ECA232G0859 Erigeron canadensis HOM05D005071 ORTHO05D006069 3.9e-07 59.7 50 54.0
PGR044G2444 Punica granatum HOM05D000034 ORTHO05D000277 3.9e-07 59.7 55 49.1
Gorai.006G053700 Gossypium raimondii HOM05D000034 ORTHO05D000277 5.1e-07 59.3 47 53.2
Gorai.009G418500 Gossypium raimondii HOM05D000034 ORTHO05D000277 5.1e-07 59.3 47 53.2
COL.COLO4_16547 Corchorus olitorius HOM05D013711 ORTHO05D000277 6.7e-07 58.9 48 41.7
Gorai.002G217500 Gossypium raimondii HOM05D000034 ORTHO05D000277 6.7e-07 58.9 47 51.1
MBI15_g04206_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.7e-07 58.9 71 42.3
PGR102G0395 Punica granatum HOM05D000034 ORTHO05D000277 1.1e-06 58.2 58 50.0
TWI31G1157 Tripterygium wilfordii HOM05D000034 ORTHO05D000277 1.1e-06 58.2 49 51.0
Dinv32704 Davidia involucrata HOM05D000034 ORTHO05D000277 1.5e-06 57.8 50 46.0
Gorai.004G043300 Gossypium raimondii HOM05D000034 ORTHO05D000277 1.5e-06 57.8 47 51.1
HanXRQChr01g0013481 Helianthus annuus HOM05D000034 ORTHO05D000277 1.5e-06 57.8 200 29.5
HanXRQChr03g0061341 Helianthus annuus HOM05D000034 ORTHO05D000277 1.5e-06 57.8 197 28.9
HanXRQChr06g0177141 Helianthus annuus HOM05D000034 ORTHO05D000277 1.5e-06 57.8 49 51.0
MBI03_g05130_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.5e-06 57.8 73 43.8
MBI03_g06065_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.5e-06 57.8 78 41.0
Dinv26538 Davidia involucrata HOM05D000034 ORTHO05D000277 2.0e-06 57.4 71 38.0
HanXRQChr10g0300111 Helianthus annuus HOM05D000034 ORTHO05D000277 2.0e-06 57.4 199 28.1
MBI14_g32135_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.0e-06 57.4 57 49.1
Lsat_1_v5_gn_7_17241 Lactuca sativa HOM05D005504 ORTHO05D002688 2.6e-06 57.0 74 33.8
PGR031G0842 Punica granatum HOM05D000034 ORTHO05D000277 2.6e-06 57.0 55 50.9
PGR102G2952 Punica granatum HOM05D000034 ORTHO05D000277 2.6e-06 57.0 55 50.9
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 3.3e-06 56.6 49 51.0
ECA247G0616 Erigeron canadensis HOM05D000034 ORTHO05D000277 3.3e-06 56.6 49 51.0
Gorai.011G154200 Gossypium raimondii HOM05D000034 ORTHO05D000277 3.3e-06 56.6 47 48.9
Lsat_1_v5_gn_8_34000 Lactuca sativa HOM05D000034 ORTHO05D000277 3.3e-06 56.6 50 50.0
MBI02_g08833_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.3e-06 56.6 62 43.5
HanXRQChr09g0256181 Helianthus annuus HOM05D000034 ORTHO05D000277 4.4e-06 56.2 197 28.4
Hma1.2p1_0317F.1_g123710 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.4e-06 56.2 57 45.6
Hma1.2p1_0354F.1_g133500 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 4.4e-06 56.2 49 51.0
Lsat_1_v5_gn_5_155181 Lactuca sativa HOM05D005504 ORTHO05D002688 4.4e-06 56.2 123 30.1
Lsat_1_v5_gn_5_28121 Lactuca sativa HOM05D000034 ORTHO05D000277 4.4e-06 56.2 62 45.2
Lsat_1_v5_gn_6_1241 Lactuca sativa HOM05D000034 ORTHO05D000277 4.4e-06 56.2 50 46.0
MBI19_g30850_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.4e-06 56.2 62 45.2
PGR031G0918 Punica granatum HOM05D000034 ORTHO05D000277 4.4e-06 56.2 55 50.9
PGR044G1696 Punica granatum HOM05D000034 ORTHO05D000277 5.7e-06 55.8 55 50.9
CANSAT11G1167 Cannabis sativa HOM05D000034 ORTHO05D000277 7.4e-06 55.5 66 45.5
COL.COLO4_28291 Corchorus olitorius HOM05D000034 ORTHO05D000277 7.4e-06 55.5 198 26.3
Lsat_1_v5_gn_6_26421 Lactuca sativa HOM05D000034 ORTHO05D000277 7.4e-06 55.5 67 43.3
ECA234G4277 Erigeron canadensis HOM05D000034 ORTHO05D000277 9.7e-06 55.1 49 46.9
MBI06_g29245_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 9.7e-06 55.1 78 41.0
RcHm_v2.0_Chr5g0072391 Rosa chinensis HOM05D000034 ORTHO05D000277 9.7e-06 55.1 128 29.7


User provided reference genes

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