Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033649 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.4e-108 396.4 203 100.0
CSS0023584 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 3.6e-101 371.7 198 96.0
CSS0046795 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 6.8e-100 367.5 203 94.1
CSS0004605 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.6e-99 365.5 203 93.6
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.0e-97 357.5 205 91.7
CSS0039680 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 6.1e-93 344.4 203 89.2
CSS0010984 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 7.0e-81 304.3 203 80.3
CSS0014156 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.3e-76 289.3 189 82.0
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.9e-66 255.0 203 70.0
CSS0041790 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 6.2e-53 211.5 221 53.4
CSS0025555 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.1e-46 190.7 218 51.4
CSS0030897 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 4.5e-27 125.6 166 46.4
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-25 120.6 236 39.0
CSS0007143 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.4e-20 103.2 116 50.9
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 9.4e-17 91.3 173 37.0
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-14 84.3 161 35.4
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 4.3e-14 82.4 88 48.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.0e-10 71.2 98 42.9
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.3e-10 70.9 190 32.6
CSS0004826 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 5.0e-10 68.9 188 32.4
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 6.5e-10 68.6 145 35.9
vmacro19402 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 1.9e-09 67.0 144 34.7
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 2.1e-08 63.5 105 39.0
Aqoxy7G01613 Aquilegia oxysepala HOM05D003219 ORTHO05D000067 4.7e-08 62.4 101 42.6
CSS0044320 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 7.9e-08 61.6 176 34.7
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 7.9e-08 61.6 146 32.2
vmacro17071 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 1.0e-07 61.2 101 43.6
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.3e-07 60.1 101 40.6
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 1.5e-06 57.4 102 38.2
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.0e-06 57.0 99 35.4
Aqoxy5G02938 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.3e-06 56.2 101 39.6


User provided reference genes

Program Settings