Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 2.7e-83 312.0 163 100.0
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 1.4e-42 176.8 103 84.5
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 2.3e-34 149.4 84 81.0
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 3.4e-33 145.6 86 80.2
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 2.8e-32 142.5 85 75.3
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 8.3e-32 141.0 85 75.3
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 5.4e-31 138.3 86 73.3
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 7.0e-31 137.9 84 71.4
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 9.1e-31 137.5 86 73.3
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 2.0e-30 136.3 136 51.5
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 5.9e-30 134.8 84 73.8
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 1.3e-29 133.7 72 83.3
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 1.3e-29 133.7 84 71.4
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 1.3e-29 133.7 86 72.1
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 3.8e-29 132.1 86 72.1
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 3.8e-29 132.1 86 72.1
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 5.0e-29 131.7 90 67.8
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 6.6e-29 131.3 87 73.6
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 8.6e-29 131.0 85 69.4
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 1.1e-28 130.6 86 69.8
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.1e-28 130.6 88 65.9
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.5e-28 130.2 84 71.4
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.9e-28 129.8 86 69.8
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 2.5e-28 129.4 86 66.3
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 3.3e-28 129.0 86 70.9
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 3.3e-28 129.0 86 70.9
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 4.2e-28 128.6 86 69.8
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 5.5e-28 128.3 88 69.3
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 5.5e-28 128.3 88 64.8
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 7.2e-28 127.9 89 67.4
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 7.2e-28 127.9 84 75.0
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 7.2e-28 127.9 88 69.3
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 9.5e-28 127.5 84 69.0
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 9.5e-28 127.5 86 67.4
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 1.2e-27 127.1 89 67.4
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 1.2e-27 127.1 86 68.6
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 1.6e-27 126.7 83 67.5
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 1.6e-27 126.7 84 67.9
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 2.1e-27 126.3 84 67.9
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 2.8e-27 125.9 89 65.2
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 3.6e-27 125.6 86 66.3
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 4.7e-27 125.2 84 65.5
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 8.0e-27 124.4 86 66.3
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 8.0e-27 124.4 86 66.3
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 8.0e-27 124.4 84 67.9
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 8.0e-27 124.4 85 64.7
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 1.0e-26 124.0 86 69.8
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 1.0e-26 124.0 84 64.3
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 1.4e-26 123.6 86 68.6
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 2.3e-26 122.9 87 65.5
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 4.0e-26 122.1 86 67.4
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 5.2e-26 121.7 86 67.4
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 5.2e-26 121.7 87 66.7
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 6.8e-26 121.3 85 63.5
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 6.8e-26 121.3 86 66.3
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 6.8e-26 121.3 73 75.3
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 6.8e-26 121.3 84 65.5
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 1.2e-25 120.6 84 65.5
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 2.0e-25 119.8 86 61.6
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 2.6e-25 119.4 81 67.9
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 3.4e-25 119.0 86 66.3
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 4.4e-25 118.6 81 66.7
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 4.4e-25 118.6 108 55.6
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 9.8e-25 117.5 84 64.3
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 1.3e-24 117.1 84 66.7
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 1.3e-24 117.1 84 72.6
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 1.7e-24 116.7 81 67.9
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 1.7e-24 116.7 84 65.5
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 3.7e-24 115.5 87 64.4
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 3.7e-24 115.5 85 64.7
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 8.3e-24 114.4 88 62.5
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 8.3e-24 114.4 84 61.9
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 1.8e-23 113.2 84 61.9
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 2.4e-23 112.8 88 60.2
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 3.2e-23 112.5 73 68.5
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 3.2e-23 112.5 85 64.7
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 4.1e-23 112.1 84 59.5
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 5.4e-23 111.7 84 59.5
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 7.0e-23 111.3 85 65.9
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 1.2e-22 110.5 84 59.5
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.6e-22 110.2 84 58.3
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 1.6e-22 110.2 84 58.3
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 2.0e-22 109.8 84 61.9
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 3.5e-22 109.0 84 61.9
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 5.9e-22 108.2 84 60.7
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 5.9e-22 108.2 84 60.7
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 7.8e-22 107.8 86 61.6
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 3.9e-21 105.5 84 60.7
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 3.9e-21 105.5 84 60.7
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 6.6e-21 104.8 84 58.3
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 8.6e-21 104.4 84 60.7
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 1.1e-20 104.0 109 51.4
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 2.5e-20 102.8 89 56.2
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 5.6e-20 101.7 95 54.7
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 1.6e-19 100.1 84 53.6
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 2.1e-19 99.8 66 71.2
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 2.1e-19 99.8 84 57.1
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 3.6e-19 99.0 84 56.0
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 1.0e-18 97.4 89 52.8
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 1.4e-18 97.1 82 59.8
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 4.4e-17 92.0 66 66.7
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 4.4e-17 92.0 80 55.0
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 6.4e-16 88.2 88 51.1
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 1.4e-15 87.0 70 54.3
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 1.4e-15 87.0 54 68.5
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.9e-15 86.7 88 48.9
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 5.4e-15 85.1 88 47.7
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 5.4e-15 85.1 88 47.7
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 3.5e-14 82.4 88 46.6
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 4.6e-14 82.0 73 54.8
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 7.8e-14 81.3 89 49.4
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 1.3e-13 80.5 93 44.1
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 6.6e-13 78.2 90 44.4
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 1.1e-12 77.4 55 60.0
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 1.5e-12 77.0 93 44.1
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 1.9e-12 76.6 95 42.1
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 1.9e-12 76.6 95 43.2
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 1.9e-12 76.6 83 48.2
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 2.5e-12 76.3 88 42.0
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 3.3e-12 75.9 97 42.3
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 4.3e-12 75.5 92 43.5
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 4.3e-12 75.5 90 43.3
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 7.3e-12 74.7 85 47.1
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 7.3e-12 74.7 55 58.2
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 1.2e-11 73.9 91 46.2
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 1.6e-11 73.6 92 43.5
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 8.9e-10 67.8 75 42.7
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 8.9e-10 67.8 75 42.7
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 8.9e-10 67.8 45 68.9
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 4.4e-09 65.5 50 54.0
RcHm_v2.0_Chr1g0326231 Rosa chinensis HOM05D005781 ORTHO05D006835 9.8e-09 64.3 59 49.2
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 8.3e-08 61.2 49 57.1
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 1.1e-07 60.8 84 40.5
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 2.4e-07 59.7 46 58.7
Zm00001eb318190 Zea mays HOM05D000360 ORTHO05D006835 1.2e-06 57.4 43 58.1


User provided reference genes

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