Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 3.1e-114 415.2 221 100.0
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.1e-58 229.2 197 67.5
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-13 80.9 109 45.0
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 2.6e-12 76.6 71 49.3
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.4e-10 68.9 104 33.7
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-09 67.4 104 33.7
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-09 67.0 61 52.5
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 1.3e-08 64.3 78 42.3
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 6.6e-08 62.0 97 36.1
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.1e-07 61.2 57 50.9
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-07 60.5 80 43.8
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.9e-07 60.5 62 48.4
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.9e-07 60.5 101 36.6
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.5e-07 60.1 99 37.4
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.3e-07 59.3 102 35.3
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.6e-07 58.9 120 31.7
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.6e-07 58.9 75 45.3
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.6e-07 58.9 79 41.8
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.6e-07 58.9 63 44.4
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.6e-07 58.9 75 45.3
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.6e-07 58.9 79 41.8
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 5.6e-07 58.9 60 48.3
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.3e-07 58.5 85 38.8
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.3e-07 58.5 85 38.8
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-06 57.8 49 59.2
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.2e-06 57.8 98 36.7
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.2e-06 57.8 75 44.0
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-06 57.8 75 44.0
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-06 57.8 75 45.3
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.8e-06 56.6 51 51.0
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.8e-06 56.6 97 35.1
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.6e-06 56.2 75 42.7
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 4.7e-06 55.8 101 34.7
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.7e-06 55.8 156 28.8
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.2e-06 55.5 60 48.3


User provided reference genes

Program Settings