Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.8e-86 322.0 174 100.0
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.0e-75 287.0 201 82.1
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.0e-75 287.0 203 81.8
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-72 276.6 201 80.6
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-69 266.5 166 83.1
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.3e-69 264.6 193 75.6
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-66 255.0 194 77.8
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.1e-61 237.3 200 65.5
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-59 232.3 201 62.7
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.0e-59 231.5 204 66.2
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.5e-58 228.0 200 66.0
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.2e-58 227.6 200 64.5
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.3e-55 218.8 109 95.4
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.1e-37 159.1 183 57.9
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-36 155.6 166 51.2
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.5e-34 150.2 165 54.5
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.5e-34 149.4 156 67.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.4e-34 147.5 186 46.2
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-28 129.8 111 59.5
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.9e-19 99.4 161 44.1
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 5.8e-15 85.1 156 41.7
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 5.0e-11 72.0 119 37.8
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 5.0e-11 72.0 121 38.0
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 8.6e-11 71.2 119 37.0
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 2.5e-10 69.7 89 40.4
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 2.5e-10 69.7 124 37.9
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 2.5e-10 69.7 124 37.9
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 3.3e-10 69.3 116 36.2
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 7.3e-10 68.2 115 41.7
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 9.5e-10 67.8 112 34.8
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 2.1e-09 66.6 89 40.4
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 2.8e-09 66.2 104 35.6
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 3.6e-09 65.9 99 39.4
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 3.6e-09 65.9 132 38.6
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 3.6e-09 65.9 101 36.6
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.1e-08 64.3 120 32.5
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.1e-08 64.3 89 39.3
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 1.4e-08 63.9 88 33.0
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 3.1e-08 62.8 76 44.7
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 4.0e-08 62.4 104 37.5
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 4.0e-08 62.4 89 33.7
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.8e-08 61.6 120 39.2
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.8e-08 61.6 120 39.2
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.8e-08 61.6 120 38.3
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.2e-07 60.8 108 31.5
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.6e-07 59.7 91 37.4
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 5.8e-07 58.5 96 37.5
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 7.5e-07 58.2 108 31.5
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 9.8e-07 57.8 112 33.0
Migut.F00817 Erythranthe guttata HOM05D020956 ORTHO05D015643 2.2e-06 56.6 75 36.0
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 2.2e-06 56.6 95 38.9
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 2.2e-06 56.6 95 38.9
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.9e-06 56.2 87 39.1
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.7e-06 55.8 73 43.8
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 4.9e-06 55.5 84 39.3
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.9e-06 55.5 46 56.5
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.9e-06 55.5 121 32.2
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.9e-06 55.5 111 33.3
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 6.4e-06 55.1 86 39.5


User provided reference genes

Program Settings