Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033603 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 5.3e-78 294.3 148 100.0
CSS0028271 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 5.9e-77 290.8 148 98.6
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.5e-59 231.1 145 80.0
CSS0003516 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 1.2e-56 223.4 145 77.2
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 4.5e-53 211.5 141 75.9
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 1.3e-15 87.0 97 43.3
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 1.3e-15 87.0 105 41.0
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 3.7e-15 85.5 91 46.2
FvH4_6g15222 Fragaria vesca HOM05D000691 ORTHO05D000378 6.4e-15 84.7 97 42.3
FvH4_6g15223 Fragaria vesca HOM05D000691 ORTHO05D000378 6.4e-15 84.7 97 42.3
RcHm_v2.0_Chr2g0137481 Rosa chinensis HOM05D000691 ORTHO05D000378 5.4e-14 81.6 100 42.0
MELO3C030703.2 Cucumis melo HOM05D010785 ORTHO05D000378 2.7e-13 79.3 128 34.4
MELO3C032462.2 Cucumis melo HOM05D010785 ORTHO05D000378 6.0e-13 78.2 128 34.4
Oeu003392.1 Olea europaea HOM05D000691 ORTHO05D000378 1.3e-12 77.0 90 45.6
Oeu003524.1 Olea europaea HOM05D000691 ORTHO05D000378 2.3e-12 76.3 90 45.6
Oeu003087.1 Olea europaea HOM05D000691 ORTHO05D000378 3.0e-12 75.9 90 44.4
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 3.9e-12 75.5 137 32.8
Oeu000188.1 Olea europaea HOM05D000691 ORTHO05D000378 5.1e-12 75.1 90 45.6
Oeu027530.1 Olea europaea HOM05D000691 ORTHO05D000378 8.6e-12 74.3 90 44.4
Oeu041682.1 Olea europaea HOM05D000691 ORTHO05D000378 8.6e-12 74.3 89 43.8
Oeu062087.1 Olea europaea HOM05D000691 ORTHO05D000378 8.6e-12 74.3 90 44.4
Oeu062537.1 Olea europaea HOM05D000691 ORTHO05D000378 8.6e-12 74.3 90 44.4
Oeu016457.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-11 73.9 90 43.3
Oeu042346.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-11 73.9 90 44.4
Oeu046813.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-11 73.9 90 43.3
Oeu007084.1 Olea europaea HOM05D000691 ORTHO05D000378 1.5e-11 73.6 90 44.4
Oeu041244.1 Olea europaea HOM05D000691 ORTHO05D000378 1.9e-11 73.2 90 42.2
Oeu018548.1 Olea europaea HOM05D000004 ORTHO05D000378 2.5e-11 72.8 90 43.3
Oeu050628.1 Olea europaea HOM05D000691 ORTHO05D000378 2.5e-11 72.8 84 47.6
Oeu028951.1 Olea europaea HOM05D000691 ORTHO05D000378 3.3e-11 72.4 90 43.3
Oeu027505.1 Olea europaea HOM05D000691 ORTHO05D000378 4.3e-11 72.0 90 43.3
Thecc.05G106700 Theobroma cacao HOM05D000691 ORTHO05D000378 4.3e-11 72.0 98 39.8
Oeu025520.1 Olea europaea HOM05D000691 ORTHO05D000378 5.6e-11 71.6 90 42.2
Oeu043573.1 Olea europaea HOM05D000691 ORTHO05D000378 5.6e-11 71.6 90 43.3
Oeu005833.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-10 70.5 90 43.3
Oeu011704.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-10 70.5 90 43.3
Oeu032031.1 Olea europaea HOM05D000691 ORTHO05D000378 1.6e-10 70.1 90 42.2
Oeu052582.1 Olea europaea HOM05D000691 ORTHO05D000378 1.6e-10 70.1 90 42.2
Oeu058973.1 Olea europaea HOM05D000691 ORTHO05D000378 1.6e-10 70.1 90 42.2
Oeu002226.1 Olea europaea HOM05D000691 ORTHO05D000378 2.8e-10 69.3 90 42.2
CSS0001178 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.6e-10 68.9 89 43.8
Oeu034465.1 Olea europaea HOM05D000691 ORTHO05D000378 3.6e-10 68.9 90 43.3
Oeu017935.1 Olea europaea HOM05D000691 ORTHO05D000378 8.1e-10 67.8 90 41.1
Oeu029673.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-09 67.4 149 31.5
Oeu033485.1 Olea europaea HOM05D000691 ORTHO05D000378 1.4e-09 67.0 90 42.2
Oeu048160.1 Olea europaea HOM05D000691 ORTHO05D000378 1.4e-09 67.0 90 42.2
Oeu048282.1 Olea europaea HOM05D000691 ORTHO05D000378 2.4e-09 66.2 90 40.0
Oeu048360.1 Olea europaea HOM05D000691 ORTHO05D000378 2.4e-09 66.2 90 41.1
Oeu006751.1 Olea europaea HOM05D000691 ORTHO05D000378 3.1e-09 65.9 90 41.1
Oeu025093.1 Olea europaea HOM05D000691 ORTHO05D000378 3.1e-09 65.9 82 43.9
Oeu026473.1 Olea europaea HOM05D000691 ORTHO05D000378 4.0e-09 65.5 90 40.0
Oeu037340.1 Olea europaea HOM05D000691 ORTHO05D000378 5.2e-09 65.1 90 41.1
Manes.17G022547 Manihot esculenta HOM05D000691 ORTHO05D000378 6.8e-09 64.7 76 39.5
Oeu036281.1 Olea europaea HOM05D000691 ORTHO05D000378 6.8e-09 64.7 90 41.1
Oeu013775.1 Olea europaea HOM05D000691 ORTHO05D000378 1.5e-08 63.5 82 42.7
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-08 63.5 102 40.2
Oeu021986.1 Olea europaea HOM05D000691 ORTHO05D000378 2.0e-08 63.2 90 36.7
Oeu012157.1 Olea europaea HOM05D000691 ORTHO05D000378 2.6e-08 62.8 82 42.7
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-08 62.8 79 40.5
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-08 62.0 79 40.5
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-08 62.0 79 40.5
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-08 62.0 102 39.2
Manes.13G002614 Manihot esculenta HOM05D000691 ORTHO05D000378 5.8e-08 61.6 143 30.8
Oeu005362.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-08 61.6 90 40.0
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 5.8e-08 61.6 79 40.5
Sopen01g010660 Solanum pennellii HOM05D000002 ORTHO05D000378 5.8e-08 61.6 97 41.2
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-08 61.6 102 39.2
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-08 61.6 102 38.2
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 7.6e-08 61.2 117 29.1
Oeu020990.1 Olea europaea HOM05D000691 ORTHO05D000378 7.6e-08 61.2 90 38.9
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-08 61.2 86 41.9
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-08 61.2 122 35.2
FvH4_5g11822 Fragaria vesca HOM05D000691 ORTHO05D000378 9.9e-08 60.8 117 29.1
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 9.9e-08 60.8 117 29.1
FvH4_7g28231 Fragaria vesca HOM05D000004 ORTHO05D000378 9.9e-08 60.8 117 29.1
Manes.15G192966 Manihot esculenta HOM05D000691 ORTHO05D000378 9.9e-08 60.8 128 28.1
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-08 60.8 102 38.2
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-08 60.8 97 41.2
Sopen07g008180 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-07 60.5 101 35.6
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-07 60.5 121 33.1
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 60.1 102 39.2
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 59.3 102 38.2
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 59.3 102 36.3
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 59.3 102 38.2
Oeu049465.1 Olea europaea HOM05D000691 ORTHO05D000378 3.8e-07 58.9 149 27.5
Sopen02g007540 Solanum pennellii HOM05D000691 ORTHO05D000378 3.8e-07 58.9 86 39.5
Sopen10g017950 Solanum pennellii HOM05D000014 ORTHO05D000016 3.8e-07 58.9 102 36.3
Oeu053713.1 Olea europaea HOM05D000691 ORTHO05D000378 4.9e-07 58.5 73 45.2
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 58.5 85 36.5
Ah.08g209110 Amaranthus hybridus HOM05D000691 ORTHO05D000378 6.4e-07 58.2 131 32.1
FvH4_2g15681 Fragaria vesca HOM05D000691 ORTHO05D000378 6.4e-07 58.2 93 34.4
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-07 58.2 98 36.7
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 1.1e-06 57.4 83 36.1
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 1.1e-06 57.4 83 36.1
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 57.4 79 38.0
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 85 35.3
Hma1.2p1_2467F.1_g322660 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 1.4e-06 57.0 182 26.4
Lj1P995G28 Lonicera japonica HOM05D000691 ORTHO05D000378 1.4e-06 57.0 113 31.9
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 1.4e-06 57.0 86 38.4
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 57.0 102 34.3
Sopen11g018910 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 57.0 102 36.3
ATR0568G014 Amborella trichopoda HOM05D000691 ORTHO05D000378 1.9e-06 56.6 116 36.2
Sopen12g020530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-06 56.2 85 40.0
Hma1.2p1_0370F.1_g137540 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 3.2e-06 55.8 175 26.9
Sopen08g011580 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 55.8 89 37.1
Sopen10g015550 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 55.8 86 37.2
Sopen12g024680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 55.8 80 35.0
ATR1131G040 Amborella trichopoda HOM05D000691 ORTHO05D000378 4.2e-06 55.5 87 39.1
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 4.2e-06 55.5 146 28.1
Lj5P491T3 Lonicera japonica HOM05D000691 ORTHO05D000378 4.2e-06 55.5 97 34.0
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-06 55.5 85 37.6
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 73 41.1
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 64 43.8
Sopen08g015300 Solanum pennellii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 85 34.1


User provided reference genes

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