Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.9e-225 785.4 372 100.0
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.1e-199 699.9 348 96.8
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.0e-165 587.0 354 79.7
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.3e-165 586.6 359 79.4
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.2e-164 582.0 374 76.2
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.2e-163 580.1 358 78.5
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 6.7e-162 574.3 355 78.0
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 8.7e-162 573.9 333 82.0
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.5e-161 573.2 356 77.0
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 5.7e-161 571.2 333 82.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.3e-160 570.1 357 77.3
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 1.3e-160 570.1 357 77.3
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.3e-160 570.1 333 81.4
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.3e-160 570.1 353 78.5
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.6e-160 569.7 356 77.2
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 2.1e-160 569.3 356 76.7
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 2.8e-160 568.9 356 76.1
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.8e-160 568.9 370 74.1
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 4.8e-160 568.2 356 76.7
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 8.2e-160 567.4 358 77.1
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 3.1e-159 565.5 358 77.1
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 9.0e-159 563.9 332 79.8
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 1.5e-158 563.1 366 74.3
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 3.4e-158 562.0 356 75.3
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 4.5e-158 561.6 356 75.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 4.5e-158 561.6 357 75.9
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 4.5e-158 561.6 354 76.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 7.6e-158 560.8 356 75.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.6e-158 560.8 378 72.0
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 7.6e-158 560.8 382 71.7
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.0e-157 560.5 357 75.6
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.3e-157 560.1 376 71.8
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.3e-157 560.1 359 73.3
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.7e-157 559.7 357 75.6
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.7e-157 559.7 359 75.5
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.2e-157 559.3 382 71.5
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.9e-157 558.9 357 75.1
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.8e-157 558.5 374 74.1
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 6.5e-157 557.8 334 78.1
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 8.5e-157 557.4 356 76.4
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.1e-156 557.0 358 75.1
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.4e-156 556.6 360 75.0
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 2.5e-156 555.8 333 77.8
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 3.2e-156 555.4 376 71.3
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 5.5e-156 554.7 333 77.5
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 5.5e-156 554.7 333 79.0
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 7.2e-156 554.3 360 73.6
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 7.2e-156 554.3 349 75.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 9.3e-156 553.9 332 79.5
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.6e-155 553.1 348 76.4
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 7.9e-155 550.8 353 75.6
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 8.7e-154 547.4 354 74.9
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.5e-153 546.6 331 78.2
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 3.3e-153 545.4 347 75.2
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 5.7e-153 544.7 357 73.9
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 5.7e-153 544.7 348 74.4
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.4e-153 544.3 399 67.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.4e-151 540.0 330 77.3
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.4e-151 539.3 334 76.6
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 4.1e-151 538.5 368 70.4
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 5.3e-151 538.1 321 79.1
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 6.9e-151 537.7 321 79.4
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 6.9e-151 537.7 355 73.2
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 4.5e-150 535.0 331 76.4
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 5.9e-150 534.6 332 76.2
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 2.2e-149 532.7 330 76.1
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 2.9e-149 532.3 336 75.9
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.9e-149 532.3 380 68.9
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.4e-148 530.0 330 75.8
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 1.9e-148 529.6 331 76.1
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.1e-147 526.2 319 77.4
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 2.1e-147 526.2 319 77.1
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.1e-147 526.2 319 77.4
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.7e-147 525.8 319 78.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.6e-147 525.4 319 77.1
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 4.6e-147 525.0 329 76.0
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 4.6e-147 525.0 352 71.6
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.0e-146 522.3 333 73.0
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 5.1e-146 521.5 333 74.5
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 2.0e-145 519.6 320 77.2
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 4.4e-145 518.5 319 76.2
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.8e-143 513.1 379 66.2
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 9.1e-143 510.8 348 70.7
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 4.7e-139 498.4 301 77.4
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 6.1e-139 498.0 333 72.4
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.8e-138 496.5 366 67.5
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 8.8e-138 494.2 367 67.3
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.3e-136 490.3 336 70.8
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.5e-134 481.9 297 75.1
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.6e-131 472.2 345 63.2
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.8e-130 469.9 316 68.7
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 7.5e-129 464.5 314 68.8
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 8.5e-125 451.1 620 44.4
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 8.5e-125 451.1 312 66.7
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.1e-124 450.7 288 73.3
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.4e-124 447.6 330 67.0
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 3.0e-114 416.0 320 61.6
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 7.0e-111 404.8 249 76.3
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 9.8e-97 357.8 214 80.8
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.7e-96 357.1 274 65.7
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.5e-92 341.3 294 59.9
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.3e-88 330.9 229 72.1
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.7e-83 312.4 355 44.2
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.5e-78 296.2 170 82.9
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 8.6e-77 291.6 356 41.9
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.4e-73 279.6 317 43.5
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-72 277.7 318 44.0
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.8e-53 214.2 195 58.5
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.8e-51 206.1 131 71.8
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 3.4e-49 199.9 323 37.5
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 5.5e-47 192.6 207 48.3
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 2.2e-43 180.6 150 63.3
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 3.2e-39 166.8 200 42.0
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 2.7e-38 163.7 208 46.2
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 7.7e-33 145.6 83 77.1
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 3.8e-24 116.7 72 69.4
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.1e-15 88.6 79 49.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.4e-10 71.6 38 73.7
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 3.6e-06 57.0 62 50.0


User provided reference genes

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