Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.2e-222 776.2 398 100.0
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 5.2e-80 302.4 429 46.9
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 6.2e-73 278.9 386 46.9
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.0e-72 276.2 417 44.6
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 5.9e-31 139.4 298 34.9
Rhsim04G0208100 Rhododendron simsii HOM05D013111 ORTHO05D013046 1.3e-30 138.3 361 31.9
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 1.1e-26 125.2 301 35.5
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.2e-23 115.2 219 36.5
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 7.7e-23 112.5 287 33.4
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.3e-22 111.7 284 31.0
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.7e-22 111.3 299 31.1
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 8.5e-22 109.0 307 29.6
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.5e-21 107.5 308 28.6
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 7.2e-21 105.9 278 32.0
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.4e-21 105.5 308 29.9
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.6e-20 104.8 319 28.2
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 2.1e-20 104.4 291 31.6
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 2.7e-20 104.0 319 29.5
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.7e-20 103.2 296 27.0
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.0e-20 102.4 308 29.5
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-19 101.3 299 30.1
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.0e-19 100.1 295 26.8
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 6.7e-19 99.4 256 28.9
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 1.1e-18 98.6 389 28.8
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.1e-18 98.6 254 31.1
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 2.0e-18 97.8 302 29.8
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 2.6e-18 97.4 242 31.0
Rhsim04G0202700 Rhododendron simsii HOM05D025536 ORTHO05D010877 2.6e-18 97.4 292 30.1
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 4.4e-18 96.7 389 28.3
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 7.5e-18 95.9 325 27.7
vmacro22846 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 1.3e-17 95.1 275 30.2
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 1.1e-16 92.0 298 27.5
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 3.1e-16 90.5 345 27.0
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.1e-16 90.5 313 29.7
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 7.0e-16 89.4 285 28.4
Dinv25051 Davidia involucrata HOM05D011324 ORTHO05D013448 9.1e-16 89.0 374 25.4
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 9.1e-16 89.0 289 25.3
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 1.2e-15 88.6 279 28.0
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.7e-15 87.4 320 29.1
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.7e-15 87.4 320 29.1
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.7e-15 87.4 320 29.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 5.9e-15 86.3 324 27.5
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.9e-15 86.3 320 28.8
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.0e-14 85.5 288 24.7
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.3e-14 85.1 320 28.8
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 2.2e-14 84.3 265 28.7
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 2.9e-14 84.0 274 29.9
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.5e-14 82.8 317 29.3
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 6.5e-14 82.8 278 29.1
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 6.5e-14 82.8 278 29.1
RhsimUnG0035000 Rhododendron simsii HOM05D010628 ORTHO05D010877 6.5e-14 82.8 294 27.9
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 8.5e-14 82.4 319 29.2
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 1.9e-13 81.3 264 28.4
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 2.5e-13 80.9 283 27.9
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 4.2e-13 80.1 273 27.5
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 4.2e-13 80.1 225 29.3
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.2e-13 80.1 300 26.3
QL01p000349 Quercus lobata HOM05D013052 ORTHO05D012831 5.5e-13 79.7 306 30.4
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.5e-13 79.7 312 26.9
CSS0015882 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 7.2e-13 79.3 281 27.8
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 1.6e-12 78.2 301 25.9
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 2.1e-12 77.8 303 29.7
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 2.7e-12 77.4 250 28.4
Rhsim12G0158900 Rhododendron simsii HOM05D000374 ORTHO05D000238 4.7e-12 76.6 324 27.2
Cfa003685 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.3e-11 74.3 267 26.6
vmacro20887 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 5.2e-11 73.2 155 32.3
COL.COLO4_09953 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.2e-10 72.0 281 27.8
Rhsim11G0059800 Rhododendron simsii HOM05D013111 ORTHO05D013046 1.2e-10 72.0 236 29.2
Lj3P635T20 Lonicera japonica HOM05D053282 ORTHO05D010877 2.0e-10 71.2 258 27.9
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 2.0e-10 71.2 334 26.0
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 2.6e-10 70.9 133 36.1
Rhsim10G0137100 Rhododendron simsii HOM05D000374 ORTHO05D013046 3.4e-10 70.5 321 26.2
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 5.7e-10 69.7 284 27.1
vmacro07913 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 5.7e-10 69.7 293 27.0
Rhsim11G0040000 Rhododendron simsii HOM05D013111 ORTHO05D013046 7.5e-10 69.3 168 34.5
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 9.8e-10 68.9 209 29.7
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 1.3e-09 68.6 209 29.2
COL.COLO4_31297 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.3e-09 68.6 93 43.0
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 1.3e-09 68.6 298 29.9
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.3e-09 68.6 311 25.1
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 2.8e-09 67.4 299 24.7
Dinv35657 Davidia involucrata HOM05D013363 ORTHO05D015094 3.7e-09 67.0 296 25.3
vmacro07414 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 3.7e-09 67.0 308 26.6
vmacro07415 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 3.7e-09 67.0 308 26.6
vmacro23394 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 3.7e-09 67.0 308 26.6
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 8.3e-09 65.9 327 24.5
vmacro22790 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 8.3e-09 65.9 308 26.6
vmacro23393 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 8.3e-09 65.9 308 26.6
CAN.G767.7 Capsicum annuum HOM05D000249 ORTHO05D000206 1.1e-08 65.5 293 27.6
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 1.4e-08 65.1 369 24.9
Rhsim07G0240000 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.4e-08 65.1 217 27.2
Solyc04g051870.3 Solanum lycopersicum HOM05D000249 ORTHO05D000206 1.4e-08 65.1 293 26.3
Sopen04g023200 Solanum pennellii HOM05D000249 ORTHO05D000206 1.4e-08 65.1 293 26.3
DCAR_024801 Daucus carota HOM05D062669 ORTHO05D045068 1.8e-08 64.7 288 26.7
Dinv35655 Davidia involucrata HOM05D013363 ORTHO05D015094 2.4e-08 64.3 285 25.6
Rhsim04G0224100 Rhododendron simsii HOM05D013111 ORTHO05D013046 2.4e-08 64.3 157 34.4
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 2.4e-08 64.3 293 26.3
Cfa007250 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.1e-08 63.9 259 27.0
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 4.1e-08 63.5 295 24.7
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 4.1e-08 63.5 123 35.8
CSS0020144 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 5.4e-08 63.2 126 37.3
Thhalv10025324m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.4e-08 63.2 191 30.9
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 7.0e-08 62.8 121 33.9
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 7.0e-08 62.8 279 27.2
CiPaw.03G134300 Carya illinoinensis HOM05D000249 ORTHO05D000206 1.6e-07 61.6 121 36.4
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 1.6e-07 61.6 196 30.6
COL.COLO4_30776 Corchorus olitorius HOM05D014846 ORTHO05D016249 2.0e-07 61.2 173 29.5
AL4G22950 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.7e-07 60.8 117 35.0
Carub.0007s0144 Capsella rubella HOM05D000249 ORTHO05D000206 2.7e-07 60.8 85 42.4
Ca_16893_v3 Cicer arietinum L. HOM05D000249 ORTHO05D000206 2.7e-07 60.8 120 33.3
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 2.7e-07 60.8 164 31.7
Rhsim03G0101600 Rhododendron simsii HOM05D001433 ORTHO05D021416 2.7e-07 60.8 164 30.5
Ah.01g016270 Amaranthus hybridus HOM05D036488 ORTHO05D021181 3.5e-07 60.5 118 33.9
Ah.01g016360 Amaranthus hybridus HOM05D036488 ORTHO05D021181 3.5e-07 60.5 118 33.9
Ah.01g016440 Amaranthus hybridus HOM05D036488 ORTHO05D021181 3.5e-07 60.5 118 33.9
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.5e-07 60.5 162 29.6
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 3.5e-07 60.5 85 43.5
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 3.5e-07 60.5 85 43.5
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 3.5e-07 60.5 85 43.5
BolC3t20528H Brassica oleracea HOM05D000249 ORTHO05D000206 3.5e-07 60.5 178 27.5
CSS0033232 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 3.5e-07 60.5 150 32.7
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 3.5e-07 60.5 292 26.4
BolC4t27199H Brassica oleracea HOM05D000249 ORTHO05D000206 4.5e-07 60.1 270 25.6
Carub.0002s2327 Capsella rubella HOM05D000249 ORTHO05D000206 4.5e-07 60.1 98 39.8
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 5.9e-07 59.7 213 28.2
AL2G17690 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.7e-07 59.3 68 41.2
BolC7t41748H Brassica oleracea HOM05D000249 ORTHO05D000206 7.7e-07 59.3 173 27.2
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 7.7e-07 59.3 122 32.8
BraA08t33441Z Brassica rapa HOM05D000249 ORTHO05D000206 1.0e-06 58.9 163 30.1
CANSAT01G1486 Cannabis sativa HOM05D000249 ORTHO05D000206 1.0e-06 58.9 120 35.0
Nitab4.5_0000904g0030 Nicotiana tabacum HOM05D000249 ORTHO05D000206 1.0e-06 58.9 214 28.5
C02p23780 Brassica napus HOM05D000249 ORTHO05D000206 1.3e-06 58.5 120 32.5
DCAR_026319 Daucus carota HOM05D062669 ORTHO05D045068 1.3e-06 58.5 278 25.5
Nn1g05186 Nelumbo nucifera HOM05D000249 ORTHO05D000206 1.3e-06 58.5 121 34.7
Aqoxy6G00478 Aquilegia oxysepala HOM05D000249 ORTHO05D000206 1.7e-06 58.2 121 34.7
BcaC06g35641 Brassica carinata HOM05D000249 ORTHO05D000206 1.7e-06 58.2 173 27.2
A06p43040 Brassica napus HOM05D000249 ORTHO05D000206 1.7e-06 58.2 210 22.4
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 1.7e-06 58.2 291 25.1
Mapoly0002s0290 Marchantia polymorpha HOM05D000667 ORTHO05D000206 2.2e-06 57.8 107 34.6
PGR004G0795 Punica granatum HOM05D000249 ORTHO05D000206 2.2e-06 57.8 121 33.9
A06p13420 Brassica napus HOM05D000249 ORTHO05D000206 2.9e-06 57.4 129 30.2
Sp1g30040 Schrenkiella parvula HOM05D000249 ORTHO05D000206 2.9e-06 57.4 154 31.2
C07p12660 Brassica napus HOM05D000249 ORTHO05D000206 3.8e-06 57.0 150 28.0
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 5.0e-06 56.6 112 33.9
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 5.0e-06 56.6 112 33.9
CSS0042303 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 5.0e-06 56.6 185 30.3
Dinv19486 Davidia involucrata HOM05D000249 ORTHO05D000206 5.0e-06 56.6 122 34.4
Rhsim05G0135400 Rhododendron simsii HOM05D013111 ORTHO05D013046 5.0e-06 56.6 204 25.5
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.5e-06 56.2 122 34.4
BcaB05g24281 Brassica carinata HOM05D000249 ORTHO05D000206 6.5e-06 56.2 113 33.6
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 6.5e-06 56.2 264 24.2
Hma1.2p1_0375F.1_g138740 Hydrangea macrophylla HOM05D000249 ORTHO05D000206 6.5e-06 56.2 107 34.6
AT3G46050 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 8.5e-06 55.8 85 35.3
A01p00990 Brassica napus HOM05D000249 ORTHO05D024028 8.5e-06 55.8 141 31.9
BolC2t08508H Brassica oleracea HOM05D000249 ORTHO05D000206 8.5e-06 55.8 120 31.7
BraA01t00097Z Brassica rapa HOM05D000249 ORTHO05D024028 8.5e-06 55.8 141 31.9


User provided reference genes

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