Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033539 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 4.5e-177 624.4 298 100.0
CSS0033824 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 8.8e-173 610.1 298 97.7
Rhsim13G0155700 Rhododendron simsii HOM05D011823 ORTHO05D014382 3.9e-72 275.8 303 50.2
CSS0007058 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 5.9e-44 182.2 204 51.5
Cfa000242 Carpinus fangiana HOM05D011823 ORTHO05D014382 7.8e-28 128.6 269 33.8
Aqoxy7G02866 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 2.5e-18 97.1 245 32.2
Aqoxy7G02867 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 3.3e-18 96.7 246 29.3
Aqoxy2G00144 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 1.8e-16 90.9 306 27.1
CSS0022060 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D014382 2.3e-16 90.5 111 46.8
Aqoxy5G01533 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 5.2e-16 89.4 246 31.7
COL.COLO4_36569 Corchorus olitorius HOM05D002077 ORTHO05D000818 2.4e-13 80.5 238 28.2
Aqoxy7G02717 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 9.2e-13 78.6 137 35.8
TAR627G0443 Trochodendron aralioides HOM05D002077 ORTHO05D000818 1.2e-12 78.2 158 35.4
CSS0029340 Camellia sinensis var. sinensis HOM05D011823 ORTHO05D000818 3.9e-11 73.2 251 26.7
Ciclev10021301m.g Citrus clementina HOM05D002077 ORTHO05D000818 1.6e-09 67.8 238 28.2
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 1.1e-08 65.1 243 26.3
Aqoxy4G02851 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 1.8e-08 64.3 245 25.3
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 3.1e-08 63.5 257 23.0
Thecc.07G038400 Theobroma cacao HOM05D002077 ORTHO05D000818 5.2e-08 62.8 308 25.3
FvH4_7g29350 Fragaria vesca HOM05D002077 ORTHO05D000818 2.0e-07 60.8 302 25.5
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 2.0e-07 60.8 302 25.8
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 2.0e-07 60.8 302 25.5
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 2.0e-07 60.8 302 25.5
Aqoxy2G00214 Aquilegia oxysepala HOM05D011823 ORTHO05D014382 2.6e-07 60.5 164 30.5
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 2.6e-07 60.5 245 27.8
RcHm_v2.0_Chr1g0377111 Rosa chinensis HOM05D002077 ORTHO05D000818 2.6e-07 60.5 266 25.9
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 3.4e-07 60.1 244 25.4
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 3.4e-07 60.1 244 27.0
Manes.06G146400 Manihot esculenta HOM05D002077 ORTHO05D000818 4.4e-07 59.7 241 25.7
DCAR_009358 Daucus carota HOM05D002077 ORTHO05D000818 5.8e-07 59.3 242 27.3
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 1.3e-06 58.2 243 24.7
Oeu021781.1 Olea europaea HOM05D002077 ORTHO05D000818 1.3e-06 58.2 150 31.3
Prupe.2G293100 Prunus persica HOM05D002077 ORTHO05D000818 1.3e-06 58.2 193 26.4
MBI18_g44743_MAGBIO Magnolia biondii HOM05D002077 ORTHO05D000818 1.7e-06 57.8 237 24.5
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 1.7e-06 57.8 241 24.9
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 2.9e-06 57.0 309 25.2
Duzib205G0590 Durio zibethinus HOM05D002077 ORTHO05D000818 2.9e-06 57.0 238 26.1
Gohir.D09G041900 Gossypium hirsutum HOM05D002077 ORTHO05D000818 2.9e-06 57.0 238 25.6
Gorai.006G048100 Gossypium raimondii HOM05D002077 ORTHO05D000818 4.9e-06 56.2 238 25.6
Manes.02G024600 Manihot esculenta HOM05D002077 ORTHO05D000818 4.9e-06 56.2 228 25.0
Nitab4.5_0000716g0180 Nicotiana tabacum HOM05D002077 ORTHO05D000818 4.9e-06 56.2 231 26.8
Lsat_1_v5_gn_2_131821 Lactuca sativa HOM05D002077 ORTHO05D000818 6.4e-06 55.8 304 24.0
Peaxi162Scf00915g00025 Petunia axillaris HOM05D002077 ORTHO05D000818 6.4e-06 55.8 241 25.7
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 6.4e-06 55.8 241 24.9
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 8.4e-06 55.5 312 24.7
COL.COLO4_14296 Corchorus olitorius HOM05D002077 ORTHO05D000818 8.4e-06 55.5 241 24.5
Dinv28453 Davidia involucrata HOM05D002077 ORTHO05D000818 8.4e-06 55.5 252 26.2
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 8.4e-06 55.5 244 25.0
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 8.4e-06 55.5 244 27.5
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 8.4e-06 55.5 307 25.7


User provided reference genes

Program Settings