Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033510 Camellia sinensis var. sinensis HOM05D034713 ORTHO05D006862 1.1e-43 179.5 88 100.0
CSS0025224 Camellia sinensis var. sinensis HOM05D034713 ORTHO05D113039 4.3e-19 97.8 87 63.2
CSS0028257 Camellia sinensis var. sinensis HOM05D034713 ORTHO05D108884 2.2e-18 95.5 86 62.8
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 4.3e-11 71.2 71 57.7
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 3.1e-09 65.1 71 49.3
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.4e-08 61.6 71 47.9
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 7.7e-08 60.5 71 46.5
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.7e-07 59.3 71 47.9
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 3.8e-07 58.2 39 66.7
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 3.8e-07 58.2 39 66.7
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 3.8e-07 58.2 71 46.5
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 8.5e-07 57.0 71 45.1
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 8.5e-07 57.0 71 47.9
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.1e-06 56.6 39 64.1
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.1e-06 56.6 39 64.1
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.1e-06 56.6 69 47.8
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.1e-06 56.6 71 45.1
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.9e-06 55.8 39 61.5
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.9e-06 55.8 39 61.5
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 1.9e-06 55.8 39 64.1
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.2e-06 55.1 38 63.2
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 4.2e-06 54.7 71 45.1
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 7.2e-06 53.9 71 43.7
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 7.2e-06 53.9 71 46.5
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 9.4e-06 53.5 71 45.1
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 9.4e-06 53.5 71 43.7


User provided reference genes

Program Settings