Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.0e-111 405.2 209 100.0
CSS0037350 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.9e-82 308.9 212 77.4
CSS0042035 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 4.2e-81 305.1 213 76.1
CSS0023474 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 6.1e-80 301.2 207 77.3
CSS0020961 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.3e-79 299.3 207 76.8
CSS0007770 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.1e-76 290.4 206 76.2
CSS0000358 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.3e-53 213.8 126 84.9
CSS0005669 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 7.8e-51 204.5 125 81.6
CSS0021225 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.8e-48 196.1 115 85.2
CSS0048041 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 6.2e-48 194.9 128 78.9
vmacro14705 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 1.3e-45 187.2 159 58.5
CSS0001814 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.6e-43 180.3 102 87.3
CSS0024445 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.9e-42 175.6 102 85.3
vmacro17519 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 1.1e-39 167.5 119 64.7
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 1.1e-25 120.9 97 60.8
CSS0036266 Camellia sinensis var. sinensis HOM05D001225 ORTHO05D001252 5.1e-18 95.5 87 62.1
CSS0001770 Camellia sinensis var. sinensis HOM05D001225 ORTHO05D001252 1.3e-16 90.9 87 59.8
CSS0039329 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 3.1e-15 86.3 46 93.5
CSS0011271 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 1.7e-13 80.5 45 88.9
CSS0028285 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 9.3e-12 74.7 100 48.0
CSS0020132 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 1.6e-11 73.9 87 55.2
CSS0027850 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 1.5e-09 67.4 99 44.4
CSS0041865 Camellia sinensis var. sinensis HOM05D011229 ORTHO05D013540 3.3e-09 66.2 42 76.2
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 6.9e-07 58.5 106 38.7
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.2e-06 57.8 30 96.7
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.2e-06 57.8 30 96.7
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-06 56.6 30 93.3
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 4.5e-06 55.8 29 89.7
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 4.5e-06 55.8 29 89.7
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 4.5e-06 55.8 29 89.7
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 7.7e-06 55.1 30 90.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 7.7e-06 55.1 30 86.7
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 7.7e-06 55.1 30 90.0
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.0e-05 54.7 108 37.0


User provided reference genes

Program Settings