Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033490 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 3.1e-46 188.0 87 100.0
CSS0049470 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.4e-41 172.6 87 92.0
CSS0008401 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 2.3e-41 171.8 87 92.0
CSS0026527 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 6.8e-41 170.2 87 90.8
CSS0024627 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 4.6e-37 157.5 79 93.7
CSS0048666 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 4.6e-37 157.5 79 93.7
CSS0034361 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.6e-26 122.5 58 96.6
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 6.2e-26 120.6 78 74.4
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 5.8e-24 114.0 78 69.2
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 7.5e-24 113.6 78 70.5
Lj1C71G15 Lonicera japonica HOM05D004940 ORTHO05D007805 1.7e-23 112.5 58 86.2
Duzib138G0347 Durio zibethinus HOM05D004940 ORTHO05D007805 2.2e-23 112.1 78 66.7
COL.COLO4_36581 Corchorus olitorius HOM05D004940 ORTHO05D007805 2.9e-23 111.7 57 82.5
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 2.9e-23 111.7 78 65.4
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 4.9e-23 110.9 56 85.7
Prupe.8G218700 Prunus persica HOM05D004940 ORTHO05D007805 4.9e-23 110.9 80 63.8
Lj1C79T2 Lonicera japonica HOM05D004940 ORTHO05D007805 6.4e-23 110.5 57 87.7
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 8.3e-23 110.2 78 65.4
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 1.1e-22 109.8 78 65.4
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 1.1e-22 109.8 56 83.9
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 1.4e-22 109.4 56 83.9
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 1.9e-22 109.0 78 65.4
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 1.9e-22 109.0 78 64.1
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 2.4e-22 108.6 78 65.4
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 3.2e-22 108.2 78 66.7
Lj1A78G31 Lonicera japonica HOM05D004940 ORTHO05D007805 3.2e-22 108.2 56 87.5
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 3.2e-22 108.2 78 65.4
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 3.2e-22 108.2 78 62.8
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 4.1e-22 107.8 78 65.4
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 4.1e-22 107.8 78 67.9
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 4.1e-22 107.8 78 64.1
Gohir.A08G045700 Gossypium hirsutum HOM05D004940 ORTHO05D007805 7.1e-22 107.1 79 67.1
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 7.1e-22 107.1 79 63.3
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 9.2e-22 106.7 79 63.3
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 9.2e-22 106.7 79 62.0
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 9.2e-22 106.7 78 64.1
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 1.2e-21 106.3 78 62.8
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 1.6e-21 105.9 78 62.8
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 1.6e-21 105.9 78 62.8
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 2.1e-21 105.5 78 62.8
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 2.7e-21 105.1 56 78.6
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 2.7e-21 105.1 56 83.9
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 2.7e-21 105.1 56 76.8
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 3.5e-21 104.8 78 62.8
PSO832G3423 Papaver somniferum HOM05D004940 ORTHO05D007805 3.5e-21 104.8 78 62.8
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 62.8
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 66.7
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 66.7
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 4.6e-21 104.4 78 61.5
DCAR_018506 Daucus carota HOM05D004940 ORTHO05D007805 6.0e-21 104.0 80 61.2
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 6.0e-21 104.0 56 75.0
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 6.0e-21 104.0 78 61.5
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 6.0e-21 104.0 78 61.5
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 7.8e-21 103.6 78 62.8
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 1.0e-20 103.2 78 64.1
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 1.0e-20 103.2 78 62.8
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 1.0e-20 103.2 79 60.8
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 1.3e-20 102.8 56 83.9
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 1.3e-20 102.8 78 62.8
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 1.3e-20 102.8 55 80.0
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 1.3e-20 102.8 79 62.0
SHI09711 Sapria himalayana HOM05D004940 ORTHO05D018819 2.3e-20 102.1 79 60.8
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 3.0e-20 101.7 57 75.4
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 3.0e-20 101.7 56 73.2
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 5.1e-20 100.9 78 61.5
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 5.1e-20 100.9 78 61.5
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 8.6e-20 100.1 57 77.2
SGA_v2.0_scaffold1G00640 Striga asiatica HOM05D004940 ORTHO05D007805 8.6e-20 100.1 72 65.3
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 1.1e-19 99.8 78 60.3
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 1.1e-19 99.8 56 82.1
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 1.9e-19 99.0 78 57.7
Peaxi162Scf00415g00416 Petunia axillaris HOM05D004940 ORTHO05D007805 2.5e-19 98.6 77 62.3
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 2.5e-19 98.6 78 59.0
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 2.5e-19 98.6 78 59.0
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 2.5e-19 98.6 78 59.0
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 3.3e-19 98.2 56 75.0
Manes.13G037500 Manihot esculenta HOM05D004940 ORTHO05D007805 3.3e-19 98.2 79 60.8
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 4.3e-19 97.8 56 76.8
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 5.6e-19 97.4 56 76.8
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 5.6e-19 97.4 78 61.5
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 5.6e-19 97.4 78 59.0
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 7.3e-19 97.1 78 57.7
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 7.3e-19 97.1 78 61.5
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 9.5e-19 96.7 56 73.2
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 1.2e-18 96.3 78 56.4
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 1.2e-18 96.3 78 57.7
Atru.chr5.1783 Acer truncatum HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 59.0
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 59.0
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 56.4
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 56.4
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 56.4
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 56.4
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 56.4
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 57.7
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 57.7
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 57.7
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 1.6e-18 95.9 78 57.7
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 3.6e-18 94.7 78 57.7
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 4.7e-18 94.4 78 56.4
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 4.7e-18 94.4 78 56.4
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 4.7e-18 94.4 56 75.0
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 4.7e-18 94.4 78 56.4
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 6.2e-18 94.0 78 56.4
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 1.1e-17 93.2 78 55.1
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 1.1e-17 93.2 78 53.8
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 2.4e-17 92.0 55 70.9
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 3.1e-17 91.7 56 73.2
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 4.0e-17 91.3 78 55.1
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 4.0e-17 91.3 78 55.1
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 4.0e-17 91.3 78 55.1
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 4.0e-17 91.3 78 55.1
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 4.0e-17 91.3 78 56.4
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 3.4e-16 88.2 78 55.1
SEGI_08888 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 6.4e-15 84.0 56 64.3
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 2.4e-14 82.0 54 68.5
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 6.0e-13 77.4 55 63.6
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 3.9e-12 74.7 54 63.0
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 1.5e-11 72.8 78 44.9
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 7.3e-11 70.5 79 46.8
HPP92_012808 Vanilla planifolia HOM05D004940 ORTHO05D007805 1.7e-07 59.3 31 80.6


User provided reference genes

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