Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033434 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 2.2e-39 165.2 88 100.0
CSS0046242 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 8.7e-36 153.3 88 93.2
CSS0009845 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 2.6e-24 115.2 96 70.8
CSS0049766 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 1.3e-23 112.8 96 69.8
Dinv13122 Davidia involucrata HOM05D002627 ORTHO05D002823 6.3e-10 67.4 61 62.3
Actinidia37686 Actinidia chinensis HOM05D002627 ORTHO05D002823 1.1e-09 66.6 61 63.9
CSS0010077 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 1.8e-09 65.9 60 63.3
Actinidia19069 Actinidia chinensis HOM05D002627 ORTHO05D002823 2.4e-09 65.5 61 62.3
ClCG01G014180 Citrullus lanatus HOM05D002627 ORTHO05D002823 2.4e-09 65.5 72 52.8
MELO3C002230.2 Cucumis melo HOM05D002627 ORTHO05D002823 2.4e-09 65.5 72 52.8
CsaV3_1G008130 Cucumis sativus L. HOM05D002627 ORTHO05D002823 2.4e-09 65.5 72 52.8
vmacro19345 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 3.1e-09 65.1 66 59.1
Rhsim12G0160600 Rhododendron simsii HOM05D002627 ORTHO05D002823 5.3e-09 64.3 59 62.7
Sed0010058 Sechium edule HOM05D002627 ORTHO05D002823 1.2e-08 63.2 72 51.4
Glyma.05G032400 Glycine max HOM05D002627 ORTHO05D002823 2.0e-08 62.4 72 54.2
Lj9C455G16 Lonicera japonica HOM05D002627 ORTHO05D002823 2.0e-08 62.4 61 60.7
Oeu038970.1 Olea europaea HOM05D002627 ORTHO05D002823 2.0e-08 62.4 73 49.3
Sopen03g032720 Solanum pennellii HOM05D002627 ORTHO05D002823 2.6e-08 62.0 66 56.1
PGSC0003DMG400024465 Solanum tuberosum HOM05D002627 ORTHO05D002823 2.6e-08 62.0 66 56.1
Phvul.003G195900 Phaseolus vulgaris HOM05D002627 ORTHO05D002823 3.4e-08 61.6 72 52.8
VMungo1215G0528 Vigna mungo HOM05D002627 ORTHO05D002823 3.4e-08 61.6 71 54.9
Lj5A119G36 Lonicera japonica HOM05D002627 ORTHO05D002823 4.5e-08 61.2 61 57.4
Peaxi162Scf00017g02214 Petunia axillaris HOM05D002627 ORTHO05D002823 4.5e-08 61.2 71 52.1
Rhsim08G0164100 Rhododendron simsii HOM05D002627 ORTHO05D002823 4.5e-08 61.2 67 56.7
Lj4g0005532 Lotus japonicus HOM05D002627 ORTHO05D002823 5.9e-08 60.8 61 57.4
arahy.Tifrunner.gnm1.ann1.AP0627 Arachis hypogaea HOM05D002627 ORTHO05D002823 7.7e-08 60.5 61 59.0
arahy.Tifrunner.gnm1.ann1.N6T05M Arachis hypogaea HOM05D002627 ORTHO05D002823 7.7e-08 60.5 60 60.0
Lsat_1_v5_gn_4_74501 Lactuca sativa HOM05D002627 ORTHO05D002823 7.7e-08 60.5 60 60.0
Nitab4.5_0000642g0200 Nicotiana tabacum HOM05D002627 ORTHO05D002823 7.7e-08 60.5 66 56.1
Nitab4.5_0002875g0040 Nicotiana tabacum HOM05D002627 ORTHO05D002823 7.7e-08 60.5 66 56.1
QL10p013948 Quercus lobata HOM05D002627 ORTHO05D002823 7.7e-08 60.5 61 57.4
vmacro16579 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 7.7e-08 60.5 61 57.4
Glyma.17G094200 Glycine max HOM05D002627 ORTHO05D002823 1.0e-07 60.1 72 54.2
HanXRQChr08g0235641 Helianthus annuus HOM05D002627 ORTHO05D002823 1.0e-07 60.1 67 50.7
Prupe.5G181800 Prunus persica HOM05D002627 ORTHO05D002823 1.0e-07 60.1 71 50.7
Actinidia34968 Actinidia chinensis HOM05D002627 ORTHO05D002823 1.3e-07 59.7 61 57.4
Medtr4g107200 Medicago truncatula HOM05D002627 ORTHO05D002823 1.3e-07 59.7 61 59.0
CANSAT80G1418 Cannabis sativa HOM05D002627 ORTHO05D002823 1.7e-07 59.3 61 57.4
Ca_21874_v3 Cicer arietinum L. HOM05D002627 ORTHO05D002823 1.7e-07 59.3 61 57.4
TPR.G38438 Trifolium pratense HOM05D002627 ORTHO05D002823 1.7e-07 59.3 61 57.4
CiPaw.11G034000 Carya illinoinensis HOM05D002627 ORTHO05D002823 2.9e-07 58.5 61 57.4
Duzib205G0221 Durio zibethinus HOM05D002627 ORTHO05D002823 2.9e-07 58.5 72 48.6
Psat7g131040 Pisum sativum HOM05D002627 ORTHO05D002823 2.9e-07 58.5 61 55.7
RcHm_v2.0_Chr7g0179941 Rosa chinensis HOM05D002627 ORTHO05D002823 3.8e-07 58.2 61 57.4
Cc04_g16140 Coffea canephora HOM05D002627 ORTHO05D002823 5.0e-07 57.8 66 53.0
RcHm_v2.0_Chr2g0169731 Rosa chinensis HOM05D002627 ORTHO05D002823 5.0e-07 57.8 60 50.0
Hund02700 Selenicereus undatus HOM05D002627 ORTHO05D002823 5.0e-07 57.8 61 50.8
Thecc.04G069700 Theobroma cacao HOM05D002627 ORTHO05D002823 5.0e-07 57.8 72 43.1
MSTRG.23077 Avicennia marina HOM05D002627 ORTHO05D002823 6.5e-07 57.4 61 52.5
Haze_07418 Corylus avellana HOM05D002627 ORTHO05D002823 6.5e-07 57.4 60 56.7
FvH4_5g16190 Fragaria vesca HOM05D002627 ORTHO05D002823 6.5e-07 57.4 61 55.7
FAN04G2684 Fragaria x ananassa HOM05D002627 ORTHO05D002823 6.5e-07 57.4 61 55.7
Aa31LG2G4640 Aethionema arabicum HOM05D002627 ORTHO05D002823 8.5e-07 57.0 72 43.1
BcaC06g33739 Brassica carinata HOM05D002627 ORTHO05D002823 8.5e-07 57.0 71 43.7
BolC7t44261H Brassica oleracea HOM05D002627 ORTHO05D002823 8.5e-07 57.0 71 43.7
BraA06t26973Z Brassica rapa HOM05D002627 ORTHO05D002823 8.5e-07 57.0 71 43.7
FAN18G0871 Fragaria x ananassa HOM05D002627 ORTHO05D002823 8.5e-07 57.0 78 51.3
AL5G18040 Arabidopsis lyrata HOM05D002627 ORTHO05D002823 1.1e-06 56.6 72 41.7
CAN.G853.37 Capsicum annuum HOM05D002627 ORTHO05D002823 1.1e-06 56.6 58 56.9
Duzib068G0784 Durio zibethinus HOM05D002627 ORTHO05D002823 1.1e-06 56.6 72 45.8
Manes.06G099300 Manihot esculenta HOM05D002627 ORTHO05D002823 1.1e-06 56.6 61 54.1
AUR62021791 Chenopodium quinoa HOM05D002627 ORTHO05D002823 1.4e-06 56.2 59 52.5
AUR62021794 Chenopodium quinoa HOM05D002627 ORTHO05D002823 1.4e-06 56.2 59 52.5
FAN08G1526 Fragaria x ananassa HOM05D002627 ORTHO05D002823 1.4e-06 56.2 61 54.1
FAN13G1829 Fragaria x ananassa HOM05D002627 ORTHO05D002823 1.4e-06 56.2 80 48.8
Gohir.D11G031000 Gossypium hirsutum HOM05D002627 ORTHO05D002823 1.4e-06 56.2 72 47.2
Gorai.007G033900 Gossypium raimondii HOM05D002627 ORTHO05D002823 1.4e-06 56.2 72 47.2
Lalb_Chr13g0298031 Lupinus albus HOM05D002627 ORTHO05D002823 1.4e-06 56.2 61 54.1
MD14G1189100 Malus domestica HOM05D002627 ORTHO05D002823 1.4e-06 56.2 60 55.0
BcaC06g30916 Brassica carinata HOM05D002627 ORTHO05D002823 1.9e-06 55.8 69 44.9
Gohir.D03G089600 Gossypium hirsutum HOM05D002627 ORTHO05D002823 1.9e-06 55.8 71 47.9
Gorai.003G071800 Gossypium raimondii HOM05D002627 ORTHO05D002823 1.9e-06 55.8 71 47.9
Lalb_Chr12g0201291 Lupinus albus HOM05D002627 ORTHO05D002823 1.9e-06 55.8 61 54.1
PGR083G1411 Punica granatum HOM05D002627 ORTHO05D002823 1.9e-06 55.8 82 45.1
CAN.G206.84 Capsicum annuum HOM05D002627 ORTHO05D002823 2.5e-06 55.5 70 44.3
Dinv33687 Davidia involucrata HOM05D002627 ORTHO05D002823 2.5e-06 55.5 73 46.6
Nn3g17059 Nelumbo nucifera HOM05D002627 ORTHO05D002823 2.5e-06 55.5 64 50.0
PGR083G1932 Punica granatum HOM05D002627 ORTHO05D002823 2.5e-06 55.5 72 43.1
SGA_v2.0_scaffold25G10857 Striga asiatica HOM05D002627 ORTHO05D002823 2.5e-06 55.5 78 41.0
Cc07_g02820 Coffea canephora HOM05D002627 ORTHO05D002823 3.2e-06 55.1 72 41.7
Eucgr.J02157 Eucalyptus grandis HOM05D002627 ORTHO05D002823 3.2e-06 55.1 64 46.9
Thhalv10005462m.g Eutrema salsugineum HOM05D002627 ORTHO05D002823 3.2e-06 55.1 59 50.8
HanXRQChr16g0503461 Helianthus annuus HOM05D002627 ORTHO05D002823 3.2e-06 55.1 66 50.0
Lsat_1_v5_gn_2_90560 Lactuca sativa HOM05D002627 ORTHO05D002823 3.2e-06 55.1 71 46.5
Nitab4.5_0002265g0070 Nicotiana tabacum HOM05D002627 ORTHO05D002823 3.2e-06 55.1 67 46.3
Peaxi162Scf00129g00637 Petunia axillaris HOM05D002627 ORTHO05D002823 3.2e-06 55.1 61 47.5
Aqoxy3G00856 Aquilegia oxysepala HOM05D002627 ORTHO05D002823 4.2e-06 54.7 74 39.2
Ciclev10019847m.g Citrus clementina HOM05D002627 ORTHO05D002823 4.2e-06 54.7 61 54.1
Migut.D01893 Erythranthe guttata HOM05D002627 ORTHO05D002823 4.2e-06 54.7 61 49.2
Sp2g17200 Schrenkiella parvula HOM05D002627 ORTHO05D002823 4.2e-06 54.7 72 41.7
THA.LOC104805426 Tarenaya hassleriana HOM05D002627 ORTHO05D002823 4.2e-06 54.7 72 43.1
EL10Ac5g10867 Beta vulgaris HOM05D002627 ORTHO05D002823 5.5e-06 54.3 61 49.2
FvH4_6g49700 Fragaria vesca HOM05D002627 ORTHO05D002823 5.5e-06 54.3 60 48.3
FAN09G0791 Fragaria x ananassa HOM05D002627 ORTHO05D002823 5.5e-06 54.3 55 52.7
Gohir.A03G076100 Gossypium hirsutum HOM05D002627 ORTHO05D002823 5.5e-06 54.3 71 46.5
Ah.02g112860 Amaranthus hybridus HOM05D002627 ORTHO05D002823 7.2e-06 53.9 61 47.5
CSS0022026 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 7.2e-06 53.9 45 62.2
CARHR292550 Cardamine hirsuta HOM05D002627 ORTHO05D002823 7.2e-06 53.9 72 40.3
CDE02G3017 Ceratophyllum demersum HOM05D002627 ORTHO05D002823 7.2e-06 53.9 60 50.0
CDE06G2464 Ceratophyllum demersum HOM05D002627 ORTHO05D002823 7.2e-06 53.9 60 50.0
AUR62008304 Chenopodium quinoa HOM05D002627 ORTHO05D002823 7.2e-06 53.9 59 50.8
FAN05G1906 Fragaria x ananassa HOM05D002627 ORTHO05D002823 7.2e-06 53.9 55 52.7
FAN14G0027 Fragaria x ananassa HOM05D002627 ORTHO05D002823 7.2e-06 53.9 55 52.7
Gohir.A11G028200 Gossypium hirsutum HOM05D002627 ORTHO05D002823 7.2e-06 53.9 72 45.8
HanXRQChr10g0317171 Helianthus annuus HOM05D002627 ORTHO05D002823 7.2e-06 53.9 60 53.3
Prupe.3G275400 Prunus persica HOM05D002627 ORTHO05D002823 7.2e-06 53.9 67 43.3
PGSC0003DMG400001402 Solanum tuberosum HOM05D002627 ORTHO05D002823 7.2e-06 53.9 67 46.3
SGA_v2.0_scaffold114G31862 Striga asiatica HOM05D002627 ORTHO05D002823 7.2e-06 53.9 84 40.5
Aqoxy3G03169 Aquilegia oxysepala HOM05D002627 ORTHO05D002823 9.4e-06 53.5 70 45.7
ECA232G1784 Erigeron canadensis HOM05D002627 ORTHO05D002823 9.4e-06 53.5 60 51.7
Nn4g22965 Nelumbo nucifera HOM05D002627 ORTHO05D002823 9.4e-06 53.5 61 50.8
PSO591G0190 Papaver somniferum HOM05D002627 ORTHO05D002823 9.4e-06 53.5 61 52.5
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 9.4e-06 53.5 59 50.8


User provided reference genes

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