Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 6.0e-69 264.2 152 100.0
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 3.8e-55 218.4 154 81.8
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.6e-53 211.8 164 75.6
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 4.6e-53 211.5 153 79.1
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.0e-52 210.3 154 77.3
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.0e-52 210.3 161 77.0
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 2.2e-50 202.6 151 72.8
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 8.2e-50 200.7 156 75.0
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.1e-49 200.3 138 79.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.4e-49 199.9 138 81.9
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 3.1e-49 198.7 154 72.7
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 3.1e-49 198.7 138 79.7
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 4.1e-49 198.4 153 72.5
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 5.3e-49 198.0 151 72.2
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 2.6e-48 195.7 151 74.2
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.0e-47 193.7 147 71.4
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 2.2e-47 192.6 149 73.2
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.9e-47 192.2 183 65.0
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 3.8e-47 191.8 153 71.9
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.4e-46 189.9 156 68.6
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.4e-46 189.9 147 72.8
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.9e-46 189.5 154 68.8
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.5e-46 189.1 154 71.4
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 2.5e-46 189.1 148 73.0
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 5.5e-46 188.0 146 71.9
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.5e-46 188.0 144 73.6
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 7.2e-46 187.6 149 71.8
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 7.2e-46 187.6 147 73.5
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 9.4e-46 187.2 140 70.7
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.2e-45 186.8 138 75.4
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 1.6e-45 186.4 144 71.5
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.1e-45 186.0 149 67.1
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 3.6e-45 185.3 149 67.1
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 3.6e-45 185.3 149 67.1
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 3.6e-45 185.3 148 69.6
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 6.1e-45 184.5 142 72.5
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.1e-45 184.5 144 72.2
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.1e-45 184.5 144 72.2
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 7.9e-45 184.1 147 70.7
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 7.9e-45 184.1 149 70.5
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.8e-44 183.0 137 71.5
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.3e-44 182.6 146 69.2
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.0e-44 182.2 147 69.4
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.0e-44 182.2 123 80.5
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.9e-44 181.8 147 69.4
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 8.8e-44 180.6 146 67.8
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.1e-43 180.3 149 67.8
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.0e-43 179.5 147 66.7
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 2.0e-43 179.5 147 68.7
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 4.4e-43 178.3 147 70.1
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.4e-43 178.3 145 66.2
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 5.7e-43 177.9 147 66.7
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 9.7e-43 177.2 145 66.2
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.3e-42 176.8 139 70.5
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 1.3e-42 176.8 145 66.2
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-42 176.4 143 71.3
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.2e-42 176.0 146 66.4
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 2.8e-42 175.6 150 67.3
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 3.7e-42 175.3 130 70.8
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 6.3e-42 174.5 137 68.6
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 6.3e-42 174.5 145 66.2
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 8.2e-42 174.1 112 83.0
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.1e-41 173.7 147 64.6
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.4e-41 173.3 125 74.4
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 2.4e-41 172.6 133 71.4
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.4e-41 172.6 137 67.9
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.1e-41 172.2 147 63.9
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.1e-41 172.2 147 63.9
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 3.1e-41 172.2 121 77.7
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 5.3e-41 171.4 143 65.0
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 7.0e-41 171.0 146 65.8
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.2e-40 170.2 154 66.9
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 3.5e-40 168.7 151 63.6
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 5.9e-40 167.9 113 77.0
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 7.7e-40 167.5 153 63.4
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.0e-39 167.2 145 62.1
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 1.0e-39 167.2 123 73.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.3e-39 166.8 151 59.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 3.8e-39 165.2 137 65.7
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 8.5e-39 164.1 141 63.1
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.5e-38 162.5 163 58.3
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.5e-38 162.5 149 63.8
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.5e-38 162.5 149 63.8
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 2.5e-38 162.5 133 66.2
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 3.2e-38 162.2 149 63.1
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.2e-38 162.2 148 64.2
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 4.2e-38 161.8 149 63.8
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 7.2e-38 161.0 149 62.4
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 7.2e-38 161.0 146 61.6
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.2e-38 161.0 169 56.2
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 9.4e-38 160.6 128 70.3
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 2.7e-37 159.1 142 60.6
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 2.7e-37 159.1 142 60.6
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.7e-37 159.1 153 62.7
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 3.6e-37 158.7 124 70.2
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 4.7e-37 158.3 161 59.6
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 1.8e-36 156.4 217 48.8
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.3e-36 156.0 178 52.8
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.5e-35 153.3 153 60.8
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 2.0e-35 152.9 133 65.4
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 7.5e-35 151.0 146 61.0
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 7.5e-35 151.0 141 65.2
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 7.5e-35 151.0 148 58.1
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.3e-34 150.2 125 67.2
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.4e-33 146.7 153 59.5
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.4e-33 146.7 161 56.5
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.1e-33 145.6 113 72.6
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.1e-33 145.2 137 62.0
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 5.3e-33 144.8 147 57.8
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 7.7e-32 141.0 139 56.8
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.0e-31 140.6 139 60.4
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.0e-31 140.6 153 60.1
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.9e-30 136.3 139 55.4
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.8e-28 129.8 311 34.4
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 5.2e-28 128.3 107 62.6
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.2e-27 127.1 109 66.1
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 2.5e-22 109.4 73 79.5
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 4.9e-18 95.1 111 54.1
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 8.3e-18 94.4 76 64.5
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.1e-17 94.0 134 42.5
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 5.0e-15 85.1 130 45.4
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 6.6e-15 84.7 137 45.3
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.3e-14 82.4 142 44.4
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 2.3e-12 76.3 77 61.0
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 9.8e-11 70.9 68 61.8
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 8.6e-07 57.8 53 62.3


User provided reference genes

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