Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033391 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.3e-156 556.6 330 100.0
CSS0026125 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.1e-155 553.5 330 99.7
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 1.3e-47 194.5 277 45.8
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 1.0e-44 184.9 161 64.6
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 5.5e-43 179.1 147 68.7
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 8.6e-36 155.2 165 49.7
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 9.8e-32 141.7 155 51.0
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 8.6e-28 128.6 222 41.9
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 1.5e-27 127.9 148 52.7
Hma1.2p1_0074F.1_g038990 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 2.5e-27 127.1 147 53.1
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 1.6e-26 124.4 147 49.0
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 2.1e-26 124.0 175 43.4
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 8.1e-26 122.1 155 49.0
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 1.4e-25 121.3 171 45.0
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 3.1e-25 120.2 158 49.4
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 6.8e-25 119.0 143 49.0
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 2.6e-24 117.1 153 53.6
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 2.6e-24 117.1 168 44.6
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 3.4e-24 116.7 171 43.3
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 9.8e-24 115.2 164 43.9
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 2.2e-23 114.0 153 49.7
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 6.4e-23 112.5 153 49.7
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 6.4e-23 112.5 153 49.7
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.1e-22 111.7 153 49.7
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 1.4e-22 111.3 161 45.3
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 3.2e-22 110.2 159 45.9
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 4.1e-22 109.8 161 44.7
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 5.4e-22 109.4 138 47.8
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 9.2e-22 108.6 167 42.5
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 1.2e-21 108.2 147 44.9
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 2.7e-21 107.1 165 44.8
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 3.5e-21 106.7 132 49.2
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 1.0e-20 105.1 153 47.7
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 1.3e-20 104.8 157 45.2
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 3.0e-20 103.6 110 51.8
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 1.5e-19 101.3 142 48.6
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 4.3e-19 99.8 150 42.0
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 7.3e-19 99.0 144 44.4
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 7.3e-19 99.0 158 46.2
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 7.3e-19 99.0 158 46.2
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 9.5e-19 98.6 151 45.0
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 3.6e-18 96.7 260 35.0
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 4.7e-18 96.3 146 41.8
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 6.2e-18 95.9 149 42.3
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 1.4e-17 94.7 179 36.3
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.4e-17 94.7 150 40.7
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 1.8e-17 94.4 150 41.3
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.3e-17 94.0 150 41.3
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 3.1e-17 93.6 181 35.4
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 3.1e-17 93.6 121 45.5
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 8.9e-17 92.0 161 41.6
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 3.4e-16 90.1 178 33.7
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 3.4e-16 90.1 177 39.0
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 4.4e-16 89.7 174 41.4
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 4.4e-16 89.7 158 38.6
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 4.4e-16 89.7 77 59.7
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 4.4e-16 89.7 124 47.6
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 5.8e-16 89.4 130 43.1
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 7.6e-16 89.0 77 58.4
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 7.6e-16 89.0 152 42.1
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 2.2e-15 87.4 148 40.5
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 2.9e-15 87.0 177 40.1
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 2.9e-15 87.0 132 43.2
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 8.4e-15 85.5 190 39.5
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 8.4e-15 85.5 191 35.6
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 2.4e-14 84.0 118 45.8
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 3.2e-14 83.6 175 36.6
CDE12G0027 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 5.4e-14 82.8 158 38.6
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 5.4e-14 82.8 122 41.8
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 7.1e-14 82.4 188 38.3
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 2.7e-13 80.5 167 38.3
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 2.7e-13 80.5 183 35.0
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 2.7e-13 80.5 62 62.9
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 3.5e-13 80.1 156 37.8
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 3.5e-13 80.1 209 33.5
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 4.6e-13 79.7 77 58.4
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 1.3e-12 78.2 165 37.0
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 3.0e-12 77.0 67 58.2
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 6.6e-12 75.9 105 44.8
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 8.6e-12 75.5 174 33.3
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 8.6e-12 75.5 87 50.6
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 1.1e-11 75.1 132 37.9
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 1.9e-11 74.3 109 44.0
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 1.9e-11 74.3 77 53.2
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 2.5e-11 73.9 167 35.9
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 3.3e-11 73.6 67 47.8
Hund26914 Selenicereus undatus HOM05D006413 ORTHO05D007722 4.3e-11 73.2 134 38.1
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 5.6e-11 72.8 166 38.0
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 1.1e-09 68.6 72 52.8
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 8.9e-09 65.5 74 50.0
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 3.4e-08 63.5 99 39.4
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 5.8e-08 62.8 83 48.2


User provided reference genes

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