Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033382 Camellia sinensis var. sinensis HOM05D002283 ORTHO05D028407 6.7e-90 334.0 165 100.0
CSS0004322 Camellia sinensis var. sinensis HOM05D002283 ORTHO05D028407 7.2e-76 287.3 165 89.7
CSS0023672 Camellia sinensis var. sinensis HOM05D002283 ORTHO05D005725 4.0e-50 201.8 183 63.9
CSS0022181 Camellia sinensis var. sinensis HOM05D002283 ORTHO05D005725 1.5e-49 199.9 189 63.0
Dinv04656 Davidia involucrata HOM05D002283 ORTHO05D005725 1.6e-46 189.9 187 60.4
Hma1.2p1_1289F.1_g273370 Hydrangea macrophylla HOM05D002283 ORTHO05D005725 7.8e-46 187.6 189 59.3
Dinv28782 Davidia involucrata HOM05D002283 ORTHO05D005725 1.3e-45 186.8 187 59.9
PGSC0003DMG400020294 Solanum tuberosum HOM05D002283 ORTHO05D005725 3.9e-45 185.3 189 56.6
Sopen09g013030 Solanum pennellii HOM05D002283 ORTHO05D005725 1.9e-44 183.0 189 56.1
Solyc09g020140.3 Solanum lycopersicum HOM05D002283 ORTHO05D005725 4.3e-44 181.8 189 55.6
CiPaw.13G058300 Carya illinoinensis HOM05D002283 ORTHO05D005725 1.2e-43 180.3 189 54.5
ClCG09G007880 Citrullus lanatus HOM05D002283 ORTHO05D005725 1.6e-43 179.9 189 57.1
Nitab4.5_0003502g0130 Nicotiana tabacum HOM05D002283 ORTHO05D005725 2.1e-43 179.5 189 55.6
Eucgr.H00684 Eucalyptus grandis HOM05D002283 ORTHO05D005725 2.8e-43 179.1 188 56.4
Oeu003683.1 Olea europaea HOM05D002283 ORTHO05D005725 2.8e-43 179.1 187 55.1
Actinidia34523 Actinidia chinensis HOM05D002283 ORTHO05D005725 3.6e-43 178.7 189 57.1
Migut.D00763 Erythranthe guttata HOM05D002283 ORTHO05D005725 4.7e-43 178.3 187 55.1
TWI53G1627 Tripterygium wilfordii HOM05D002283 ORTHO05D005725 4.7e-43 178.3 189 56.1
Duzib138G0576 Durio zibethinus HOM05D002283 ORTHO05D005725 6.2e-43 177.9 189 54.0
Peaxi162Scf00169g00012 Petunia axillaris HOM05D002283 ORTHO05D005725 6.2e-43 177.9 174 58.0
Sed0021942 Sechium edule HOM05D002283 ORTHO05D005725 6.2e-43 177.9 189 55.6
Nitab4.5_0013369g0010 Nicotiana tabacum HOM05D002283 ORTHO05D005725 8.1e-43 177.6 188 54.8
Potri.014G174200 Populus trichocarpa HOM05D002283 ORTHO05D005725 8.1e-43 177.6 195 55.4
MELO3C015718.2 Cucumis melo HOM05D002283 ORTHO05D005725 1.1e-42 177.2 188 55.3
CsaV3_7G027190 Cucumis sativus L. HOM05D002283 ORTHO05D005725 1.1e-42 177.2 188 55.3
Cc04_g10330 Coffea canephora HOM05D002283 ORTHO05D005725 1.8e-42 176.4 189 55.0
Thecc.01G205600 Theobroma cacao HOM05D002283 ORTHO05D005725 2.3e-42 176.0 189 54.0
CSS0013505 Camellia sinensis var. sinensis HOM05D002283 ORTHO05D005725 3.1e-42 175.6 189 56.6
Ciclev10032421m.g Citrus clementina HOM05D002283 ORTHO05D005725 3.1e-42 175.6 188 53.2
Duzib133G0945 Durio zibethinus HOM05D002283 ORTHO05D005725 1.2e-41 173.7 189 54.0
Peaxi162Scf00995g00325 Petunia axillaris HOM05D002283 ORTHO05D005725 1.2e-41 173.7 189 54.5
QL06p016631 Quercus lobata HOM05D002283 ORTHO05D005725 1.2e-41 173.7 188 54.8
SGA_v2.0_scaffold8G04485 Striga asiatica HOM05D002283 ORTHO05D005725 1.2e-41 173.7 188 54.8
TAR636G0268 Trochodendron aralioides HOM05D002283 ORTHO05D005725 1.2e-41 173.7 188 53.2
Atru.chr6.474 Acer truncatum HOM05D002283 ORTHO05D005725 1.5e-41 173.3 188 54.3
COL.COLO4_29923 Corchorus olitorius HOM05D002283 ORTHO05D005725 1.5e-41 173.3 189 52.4
Sabra14G0133500 Salix brachista HOM05D002283 ORTHO05D005725 1.5e-41 173.3 187 55.1
Cpa.g.sc8.26 Carica papaya HOM05D002283 ORTHO05D005725 2.6e-41 172.6 189 51.3
Nn8g38671 Nelumbo nucifera HOM05D002283 ORTHO05D005725 2.6e-41 172.6 188 54.3
CANSAT35G1200 Cannabis sativa HOM05D002283 ORTHO05D005725 3.4e-41 172.2 189 51.9
GSVIVG01001907001 Vitis vinifera HOM05D002283 ORTHO05D005725 5.8e-41 171.4 188 54.3
ECA247G0029 Erigeron canadensis HOM05D002283 ORTHO05D005725 7.6e-41 171.0 194 52.6
PGR119G0195 Punica granatum HOM05D002283 ORTHO05D005725 7.6e-41 171.0 188 53.7
CSS0034812 Camellia sinensis var. sinensis HOM05D002283 ORTHO05D005725 9.9e-41 170.6 178 60.1
Gohir.A07G089100 Gossypium hirsutum HOM05D002283 ORTHO05D005725 9.9e-41 170.6 187 52.4
Gohir.D07G094000 Gossypium hirsutum HOM05D002283 ORTHO05D005725 9.9e-41 170.6 187 52.4
Gorai.001G100800 Gossypium raimondii HOM05D002283 ORTHO05D005725 9.9e-41 170.6 187 52.4
MSTRG.18513 Avicennia marina HOM05D002283 ORTHO05D005725 1.3e-40 170.2 187 54.0
DCAR_018604 Daucus carota HOM05D002283 ORTHO05D005725 1.3e-40 170.2 189 53.4
Lsat_1_v5_gn_9_17160 Lactuca sativa HOM05D002283 ORTHO05D005725 1.3e-40 170.2 194 52.1
QL11p010737 Quercus lobata HOM05D002283 ORTHO05D005725 1.3e-40 170.2 188 53.7
arahy.Tifrunner.gnm1.ann1.577AC6 Arachis hypogaea HOM05D002283 ORTHO05D005725 2.2e-40 169.5 188 53.7
Manes.12G057506 Manihot esculenta HOM05D002283 ORTHO05D005725 2.2e-40 169.5 188 53.7
Manes.12G057903 Manihot esculenta HOM05D002283 ORTHO05D005725 2.2e-40 169.5 188 53.7
Glyma.08G288700 Glycine max HOM05D002283 ORTHO05D005725 2.9e-40 169.1 189 52.4
unitig_0.g794 Utricularia gibba HOM05D002283 ORTHO05D005725 2.9e-40 169.1 195 51.8
Aqoxy3G04331 Aquilegia oxysepala HOM05D002283 ORTHO05D005725 4.9e-40 168.3 191 54.5
VMungo0540G2305 Vigna mungo HOM05D002283 ORTHO05D005725 6.4e-40 167.9 189 52.4
HanXRQChr08g0231361 Helianthus annuus HOM05D002283 ORTHO05D005725 8.4e-40 167.5 182 54.4
Prupe.3G166900 Prunus persica HOM05D002283 ORTHO05D005725 1.1e-39 167.2 189 50.8
Cfa010632 Carpinus fangiana HOM05D002283 ORTHO05D005725 1.9e-39 166.4 188 52.1
MBI19_g03264_MAGBIO Magnolia biondii HOM05D002283 ORTHO05D005725 1.9e-39 166.4 189 51.3
MD09G1159000 Malus domestica HOM05D002283 ORTHO05D005725 1.9e-39 166.4 197 50.8
Sc26g0001390 Simmondsia chinensis HOM05D002283 ORTHO05D005725 2.4e-39 166.0 188 50.5
Lalb_Chr01g0020781 Lupinus albus HOM05D002283 ORTHO05D005725 4.1e-39 165.2 188 52.1
CDE04G1029 Ceratophyllum demersum HOM05D002283 ORTHO05D005725 5.4e-39 164.9 187 50.8
Manes.12G058106 Manihot esculenta HOM05D002283 ORTHO05D005725 5.4e-39 164.9 188 53.2
Manes.12G058907 Manihot esculenta HOM05D002283 ORTHO05D005725 5.4e-39 164.9 188 53.2
Phvul.006G048300 Phaseolus vulgaris HOM05D002283 ORTHO05D005725 7.1e-39 164.5 189 50.3
PSO782G5218 Papaver somniferum HOM05D002283 ORTHO05D005725 9.2e-39 164.1 189 51.9
Lalb_Chr03g0037871 Lupinus albus HOM05D002283 ORTHO05D005725 1.2e-38 163.7 188 51.6
ATR0753G108 Amborella trichopoda HOM05D002283 ORTHO05D005725 4.6e-38 161.8 187 49.2
MD17G1145200 Malus domestica HOM05D002283 ORTHO05D005725 7.8e-38 161.0 189 50.8
PSO063G3354 Papaver somniferum HOM05D002283 ORTHO05D005725 7.8e-38 161.0 189 51.3
Nitab4.5_0001015g0010 Nicotiana tabacum HOM05D002283 ORTHO05D005725 1.7e-37 159.8 215 47.9
Os03g0714400 Oryza sativa ssp. japonica HOM05D002283 ORTHO05D005725 1.7e-37 159.8 187 50.3
HPP92_006935 Vanilla planifolia HOM05D002283 ORTHO05D005725 2.3e-37 159.5 189 50.3
arahy.Tifrunner.gnm1.ann1.37ANK5 Arachis hypogaea HOM05D002283 ORTHO05D005725 3.0e-37 159.1 189 51.3
FvH4_6g37261 Fragaria vesca HOM05D002283 ORTHO05D005725 1.1e-36 157.1 185 50.8
FAN02G0377 Fragaria x ananassa HOM05D002283 ORTHO05D005725 1.1e-36 157.1 185 50.8
FAN05G5505 Fragaria x ananassa HOM05D002283 ORTHO05D005725 1.1e-36 157.1 185 50.8
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 1.1e-36 157.1 185 50.8
AUR62008457 Chenopodium quinoa HOM05D002283 ORTHO05D005725 1.5e-36 156.8 187 50.8
AUR62021638 Chenopodium quinoa HOM05D002283 ORTHO05D005725 1.5e-36 156.8 187 50.8
RcHm_v2.0_Chr2g0150081 Rosa chinensis HOM05D002283 ORTHO05D005725 2.5e-36 156.0 186 50.0
Psat5g112120 Pisum sativum HOM05D002283 ORTHO05D005725 4.3e-36 155.2 189 48.7
THA.LOC104815388 Tarenaya hassleriana HOM05D002283 ORTHO05D005725 7.3e-36 154.5 187 48.7
EL10Ac6g13986 Beta vulgaris HOM05D002283 ORTHO05D005725 1.2e-35 153.7 187 49.2
THA.LOC104826642 Tarenaya hassleriana HOM05D002283 ORTHO05D005725 1.2e-35 153.7 191 49.2
RcHm_v2.0_Chr3g0481161 Rosa chinensis HOM05D002283 ORTHO05D005725 2.1e-35 152.9 186 50.0
Gorai.007G161900 Gossypium raimondii HOM05D002283 ORTHO05D005725 3.6e-35 152.1 194 46.9
Medtr3g080040 Medicago truncatula HOM05D002283 ORTHO05D005725 3.6e-35 152.1 189 48.1
Lj6g0014346 Lotus japonicus HOM05D002283 ORTHO05D005725 4.7e-35 151.8 189 49.7
FAN14G3055 Fragaria x ananassa HOM05D002283 ORTHO05D005725 8.1e-35 151.0 176 48.9
Zm00001eb112910 Zea mays HOM05D002283 ORTHO05D005725 3.1e-34 149.1 168 48.8
Ah.03g140230 Amaranthus hybridus HOM05D002283 ORTHO05D005725 1.2e-33 147.1 186 47.8
Ah.12g064970 Amaranthus hybridus HOM05D002283 ORTHO05D005725 1.2e-33 147.1 189 48.7
Zm00001eb216170 Zea mays HOM05D002283 ORTHO05D005725 1.5e-33 146.7 187 46.5
Ca_16270_v3 Cicer arietinum L. HOM05D002283 ORTHO05D005725 2.0e-33 146.4 189 48.7
Aa31sc565G10 Aethionema arabicum HOM05D002283 ORTHO05D005725 3.4e-33 145.6 188 45.7
Os03g0337700 Oryza sativa ssp. japonica HOM05D002283 ORTHO05D005725 3.4e-33 145.6 186 48.4
SEGI_09812 Sequoiadendron giganteum HOM05D002283 ORTHO05D005725 9.9e-33 144.1 188 43.1
SHI10211 Sapria himalayana HOM05D002283 ORTHO05D005725 1.3e-32 143.7 177 49.2
Hund09474 Selenicereus undatus HOM05D002283 ORTHO05D005725 4.9e-32 141.7 188 46.8
Aa31sc134G10 Aethionema arabicum HOM05D002283 ORTHO05D005725 1.1e-31 140.6 188 46.3
Thhalv10003026m.g Eutrema salsugineum HOM05D002283 ORTHO05D005725 2.4e-31 139.4 187 44.4
Carub.0007s3003 Capsella rubella HOM05D002283 ORTHO05D005725 5.4e-31 138.3 188 44.7
Mapoly0043s0065 Marchantia polymorpha HOM05D002283 ORTHO05D005725 5.4e-31 138.3 185 41.6
CARHR218080 Cardamine hirsuta HOM05D002283 ORTHO05D005725 7.1e-31 137.9 187 44.9
AT4G12790 Arabidopsis thaliana HOM05D002283 ORTHO05D005725 9.3e-31 137.5 195 43.1
BcaB03g16149 Brassica carinata HOM05D002283 ORTHO05D005725 9.3e-31 137.5 195 42.6
HanXRQChr05g0159331 Helianthus annuus HOM05D002283 ORTHO05D005725 9.3e-31 137.5 81 82.7
BcaB08g34457 Brassica carinata HOM05D002283 ORTHO05D005725 1.2e-30 137.1 187 44.9
BcaC02g09468 Brassica carinata HOM05D002283 ORTHO05D005725 1.2e-30 137.1 195 42.6
Lj2C1109G24 Lonicera japonica HOM05D002283 ORTHO05D005725 1.2e-30 137.1 82 84.1
CAN.G2034.3 Capsicum annuum HOM05D002283 ORTHO05D005725 1.6e-30 136.7 192 47.4
AL9U11810 Arabidopsis lyrata HOM05D002283 ORTHO05D005725 2.1e-30 136.3 188 43.1
C04p43130 Brassica napus HOM05D002283 ORTHO05D005725 2.1e-30 136.3 196 42.9
BolC4t25890H Brassica oleracea HOM05D002283 ORTHO05D005725 2.1e-30 136.3 196 42.9
Sp7g09370 Schrenkiella parvula HOM05D002283 ORTHO05D005725 4.6e-30 135.2 188 42.6
AagrBONN_evm.TU.Sc2ySwM_344.4067 Anthoceros agrestis HOM05D002283 ORTHO05D005725 1.0e-29 134.0 187 39.0
A04p09170 Brassica napus HOM05D002283 ORTHO05D005725 1.0e-29 134.0 196 42.3
BraA04t16610Z Brassica rapa HOM05D002283 ORTHO05D005725 1.0e-29 134.0 196 42.3
vmacro14676 Vaccinium macrocarpon HOM05D002283 ORTHO05D005725 1.3e-29 133.7 203 46.3
BolC3t17747H Brassica oleracea HOM05D002283 ORTHO05D005725 3.9e-29 132.1 187 44.4
BcaC01g03221 Brassica carinata HOM05D002283 ORTHO05D005725 5.1e-29 131.7 187 44.4
C03p54610 Brassica napus HOM05D002283 ORTHO05D005725 5.1e-29 131.7 187 44.4
BraA03t13551Z Brassica rapa HOM05D002283 ORTHO05D005725 5.1e-29 131.7 187 42.2
A03p44220 Brassica napus HOM05D002283 ORTHO05D005725 1.5e-28 130.2 187 43.3
Pp3c19_7220 Physcomitrium patens HOM05D002283 ORTHO05D005725 3.1e-26 122.5 188 36.7
SMO200G0002 Selaginella moellendorffii HOM05D002283 ORTHO05D005725 6.9e-26 121.3 188 37.8
CBR_g16045 Chara braunii HOM05D002283 ORTHO05D005725 2.0e-25 119.8 185 37.8
CDE03G0519 Ceratophyllum demersum HOM05D002283 ORTHO05D005725 7.1e-23 111.3 164 42.1
FvH4_6g36140 Fragaria vesca HOM05D002283 ORTHO05D028407 5.6e-20 101.7 62 80.6
Cre04.g212650 Chlamydomonas reinhardtii HOM05D002283 ORTHO05D005725 1.3e-19 100.5 189 34.9
Gohir.A11G144600 Gossypium hirsutum HOM05D002283 ORTHO05D005725 4.8e-19 98.6 157 40.8
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 9.9e-17 90.9 185 36.8
Peaxi162Scf00169g00008 Petunia axillaris HOM05D002283 ORTHO05D005725 1.3e-16 90.5 156 41.0
MCO01G727 Micromonas commoda HOM05D002283 ORTHO05D005725 4.9e-16 88.6 178 31.5
ECA236G3045 Erigeron canadensis HOM05D002283 ORTHO05D035164 2.4e-15 86.3 62 69.4
SMO200G0096 Selaginella moellendorffii HOM05D002283 ORTHO05D005725 2.4e-15 86.3 176 34.7
PGR083G1673 Punica granatum HOM05D002283 ORTHO05D005725 4.6e-14 82.0 138 42.0
CARHR085170 Cardamine hirsuta HOM05D002283 ORTHO05D028407 3.0e-13 79.3 69 60.9
Haze_03574 Corylus avellana HOM05D002283 ORTHO05D005725 6.7e-13 78.2 163 35.0
AUR62008627 Chenopodium quinoa HOM05D002283 ORTHO05D138025 8.7e-13 77.8 115 42.6
PRCOL_00002035 Prasinoderma coloniale HOM05D002283 ORTHO05D005725 9.6e-12 74.3 196 26.0
Gohir.D11G151633 Gossypium hirsutum HOM05D002283 ORTHO05D005725 2.8e-11 72.8 150 40.0
Haze_27366 Corylus avellana HOM05D002283 ORTHO05D005725 4.8e-11 72.0 185 30.3
Thhalv10025507m.g Eutrema salsugineum HOM05D002283 ORTHO05D005725 4.0e-10 68.9 139 33.8
Peaxi162Scf02641g00002 Petunia axillaris HOM05D002283 ORTHO05D005725 7.6e-09 64.7 35 80.0
Nitab4.5_0000231g0320 Nicotiana tabacum HOM05D002283 ORTHO05D005725 4.9e-08 62.0 148 36.5
Ca_00627_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 1.1e-07 60.8 138 34.8


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