Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.4e-33 144.4 75 100.0
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-30 136.0 74 94.6
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.6e-30 135.6 74 93.2
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.6e-30 135.6 74 93.2
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.3e-28 127.9 75 89.3
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.4e-28 127.5 70 94.3
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.4e-28 127.5 74 89.2
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.7e-28 126.3 72 90.3
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.8e-27 124.8 74 87.8
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.8e-26 122.1 75 85.3
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.8e-26 122.1 74 85.1
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-25 119.4 75 84.0
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.4e-23 112.5 67 91.0
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.9e-23 112.1 67 86.6
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-22 109.4 69 82.6
CSS0037680 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.5e-15 85.1 54 79.6
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-14 82.8 74 54.1
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.2e-14 82.8 74 54.1
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-14 82.8 74 54.1
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-14 82.4 74 54.1
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-14 82.4 74 54.1
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-14 82.4 74 54.1
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-14 81.6 74 52.7
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-14 81.6 74 52.7
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-14 81.6 72 54.2
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-14 81.6 72 54.2
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-14 81.3 74 52.7
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-14 80.9 70 54.3
CSS0012123 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.1e-14 80.5 47 87.2
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-14 80.5 74 50.0
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-14 80.5 74 51.4
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-14 80.1 71 53.5
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-13 79.7 74 52.7
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 79.3 73 53.4
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-13 79.3 74 50.0
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.3e-13 78.6 72 54.2
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-13 78.2 74 50.0
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-13 78.2 74 50.0
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 5.2e-13 77.4 68 55.9
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.2e-13 77.4 68 55.9
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-12 75.1 72 51.4
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 3.4e-12 74.7 72 48.6
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-12 73.9 65 58.5
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-12 73.9 65 58.5
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-12 73.9 65 58.5
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.5e-12 73.6 65 58.5
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-12 73.2 72 50.0
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.8e-11 71.6 72 50.0
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.8e-11 71.6 67 53.7
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.8e-11 70.9 65 55.4
CSS0006141 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.4e-10 69.3 42 81.0
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 1.8e-10 68.9 65 50.8
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 3.1e-10 68.2 64 53.1
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 4.1e-10 67.8 74 47.3
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 7.0e-10 67.0 67 52.2
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 9.1e-10 66.6 66 47.0
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 9.1e-10 66.6 66 47.0
CSS0030801 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-09 66.2 41 80.5
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-09 66.2 66 47.0
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-09 66.2 66 47.0
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 1.2e-09 66.2 66 47.0
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.2e-09 66.2 58 51.7
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 1.6e-09 65.9 66 47.0
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 65.9 66 47.0
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 1.6e-09 65.9 66 47.0
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 65.9 66 47.0
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 1.6e-09 65.9 66 47.0
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 1.6e-09 65.9 66 47.0
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 2.0e-09 65.5 68 44.1
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-09 65.5 66 45.5
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-09 65.5 66 48.5
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 2.7e-09 65.1 71 43.7
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 2.7e-09 65.1 71 43.7
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.7e-09 65.1 64 48.4
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.7e-09 65.1 64 48.4
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 2.7e-09 65.1 66 47.0
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 2.7e-09 65.1 62 48.4
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.7e-09 65.1 58 51.7
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 3.5e-09 64.7 63 49.2
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 4.5e-09 64.3 69 44.9
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 4.5e-09 64.3 66 45.5
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 4.5e-09 64.3 61 50.8
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.5e-09 64.3 69 46.4
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 7.7e-09 63.5 61 49.2
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.0e-08 63.2 74 45.9
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.0e-08 63.2 66 47.0
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-08 62.8 69 46.4
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 1.3e-08 62.8 61 50.8
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.3e-08 62.8 58 50.0
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 1.3e-08 62.8 65 44.6
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.2e-08 62.0 73 46.6
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 2.2e-08 62.0 66 43.9
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 2.2e-08 62.0 69 43.5
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.9e-08 61.6 58 48.3
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 3.8e-08 61.2 64 48.4
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 3.8e-08 61.2 58 48.3
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 5.0e-08 60.8 65 46.2
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 60.8 63 44.4
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.5e-08 60.5 56 53.6
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 6.5e-08 60.5 58 50.0
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 6.5e-08 60.5 58 50.0
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.5e-08 60.5 58 48.3
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 8.5e-08 60.1 75 45.3
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 8.5e-08 60.1 75 45.3
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 8.5e-08 60.1 58 50.0
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 8.5e-08 60.1 66 42.4
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 8.5e-08 60.1 69 42.0
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 1.1e-07 59.7 69 42.0
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.1e-07 59.7 68 42.6
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.1e-07 59.7 68 42.6
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.1e-07 59.7 68 42.6
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 1.1e-07 59.7 69 47.8
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.1e-07 59.7 58 48.3
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.5e-07 59.3 68 42.6
MBI01_g37335_MAGBIO Magnolia biondii HOM05D009540 ORTHO05D000034 1.5e-07 59.3 65 44.6
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 1.9e-07 58.9 58 48.3
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 2.5e-07 58.5 58 48.3
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.5e-07 58.5 69 42.0
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.2e-07 58.2 63 44.4
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.2e-07 58.2 68 41.2
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-07 58.2 65 43.1
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 4.2e-07 57.8 58 50.0
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.2e-07 57.8 69 42.0
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 5.5e-07 57.4 63 44.4
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.2e-07 57.0 63 39.7
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 7.2e-07 57.0 63 39.7
Hma1.2p1_0344F.1_g131150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 9.4e-07 56.6 68 41.2
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 9.4e-07 56.6 58 48.3
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 9.4e-07 56.6 56 50.0
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 9.4e-07 56.6 65 41.5
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-06 56.2 61 42.6
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 1.6e-06 55.8 58 48.3
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.1e-06 55.5 71 40.8
Oeu003531.1 Olea europaea HOM05D009054 ORTHO05D000034 2.1e-06 55.5 54 50.0
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-06 55.1 69 39.1
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 2.7e-06 55.1 63 44.4
MBI09_g04629_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 2.7e-06 55.1 63 42.9
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 2.7e-06 55.1 57 47.4
Rhsim11G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.7e-06 55.1 62 41.9
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-06 54.7 64 40.6
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.6e-06 54.7 56 44.6
THA.LOC109117280 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.6e-06 54.7 72 36.1
CSS0002976 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.7e-06 54.3 39 69.2
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.7e-06 54.3 72 36.1
Rhsim10G0111100 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.1e-06 53.9 74 33.8
Rhsim10G0111300 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.1e-06 53.9 74 33.8
FvH4_4g16282 Fragaria vesca HOM05D011494 ORTHO05D000034 8.0e-06 53.5 65 41.5
Oeu006584.1 Olea europaea HOM05D009054 ORTHO05D000034 8.0e-06 53.5 59 42.4
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 8.0e-06 53.5 72 33.3
THA.LOC109116329 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.0e-06 53.5 72 33.3


User provided reference genes

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