Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.6e-157 559.3 266 100.0
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.3e-148 529.6 285 90.9
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-105 386.0 221 87.3
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.6e-104 383.3 231 83.5
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.8e-97 359.8 221 79.6
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.9e-94 349.7 215 80.0
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 2.5e-94 349.4 221 79.6
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 3.3e-94 349.0 219 79.0
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.1e-93 346.3 223 78.0
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 2.8e-93 345.9 215 78.1
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 2.8e-93 345.9 219 77.2
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 3.6e-93 345.5 221 75.1
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 3.6e-93 345.5 214 79.0
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 3.1e-92 342.4 221 76.0
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 5.2e-92 341.7 215 77.7
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 8.9e-92 340.9 221 75.1
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.2e-91 340.5 215 77.7
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.2e-91 340.5 215 77.2
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.2e-91 340.5 215 77.2
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 2.6e-91 339.3 227 74.9
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.3e-90 337.0 215 76.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.7e-90 336.7 214 77.1
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 3.7e-90 335.5 213 77.5
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 4.9e-90 335.1 214 76.6
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 4.9e-90 335.1 219 75.3
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 4.9e-90 335.1 210 76.2
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 6.4e-90 334.7 219 74.9
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 6.4e-90 334.7 214 76.2
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 6.4e-90 334.7 214 76.2
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.4e-89 333.6 210 78.1
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.9e-89 333.2 210 77.6
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.9e-89 333.2 214 75.7
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.4e-89 332.8 219 74.4
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 3.2e-89 332.4 214 76.2
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 4.1e-89 332.0 214 75.7
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.1e-89 332.0 214 75.7
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 9.2e-89 330.9 216 75.5
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 1.2e-88 330.5 213 74.2
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.0e-88 329.7 214 75.2
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 2.0e-88 329.7 219 73.5
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 4.6e-88 328.6 213 75.6
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 6.0e-88 328.2 212 75.9
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.0e-87 327.4 210 76.7
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.7e-87 326.6 215 72.6
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 2.3e-87 326.2 210 76.2
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 3.0e-87 325.9 210 77.6
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 3.0e-87 325.9 215 74.0
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 3.0e-87 325.9 209 76.1
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 8.6e-87 324.3 210 76.2
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.5e-86 323.6 213 75.6
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.9e-86 323.2 218 74.3
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 4.3e-86 322.0 210 76.7
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 4.3e-86 322.0 210 76.2
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 5.6e-86 321.6 219 72.1
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 7.3e-86 321.2 209 76.1
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 9.5e-86 320.9 210 75.2
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.4e-84 317.0 215 73.5
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.3e-84 316.2 210 74.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.3e-84 316.2 210 74.8
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 3.1e-84 315.8 210 74.8
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 3.1e-84 315.8 210 75.7
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 4.0e-84 315.5 208 73.6
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 4.0e-84 315.5 212 75.0
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 8.9e-84 314.3 212 74.1
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 8.9e-84 314.3 212 74.1
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 8.9e-84 314.3 212 74.1
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 8.9e-84 314.3 212 74.1
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.2e-83 313.9 210 74.3
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.2e-83 313.9 212 75.0
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.5e-83 313.5 210 73.3
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 3.4e-83 312.4 210 74.3
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 4.4e-83 312.0 210 73.3
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.7e-82 310.1 208 76.0
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 2.9e-82 309.3 221 71.9
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.4e-81 307.0 212 73.1
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 5.4e-81 305.1 213 71.8
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 9.2e-81 304.3 210 73.3
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 9.2e-81 304.3 210 73.3
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 4.6e-80 302.0 208 71.2
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 4.6e-80 302.0 210 73.3
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 1.3e-79 300.4 213 71.8
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 1.7e-79 300.1 221 67.9
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 2.3e-79 299.7 210 71.9
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 5.1e-79 298.5 239 66.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 5.1e-79 298.5 215 67.4
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 8.6e-79 297.7 210 72.4
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 1.6e-77 293.5 186 76.3
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 3.4e-75 285.8 188 76.6
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 9.9e-75 284.3 195 71.8
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.2e-74 283.1 199 73.9
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 3.8e-74 282.3 208 67.3
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 8.4e-74 281.2 186 74.7
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 5.4e-73 278.5 187 75.4
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 2.7e-72 276.2 210 65.7
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 1.1e-70 270.8 235 60.9
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 1.1e-70 270.8 187 72.7
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 9.0e-68 261.2 174 73.0
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 5.8e-67 258.5 156 79.5
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 5.1e-63 245.4 185 67.0
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 8.1e-61 238.0 210 58.6
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 4.9e-58 228.8 207 57.0
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 6.0e-56 221.9 209 54.5
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 4.3e-54 215.7 204 54.9
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 6.4e-50 201.8 117 82.1
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 8.4e-50 201.4 118 80.5
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 7.1e-49 198.4 211 49.8
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.0e-43 180.3 116 75.9
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 5.8e-43 178.7 213 48.8
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 6.0e-40 168.7 226 44.7
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.8e-37 159.8 137 58.4
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 9.0e-36 154.8 209 39.7
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 2.5e-33 146.7 205 39.5
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.2e-29 133.7 103 66.0
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.1e-28 129.4 91 69.2
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 3.4e-27 126.3 82 75.6
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 2.2e-26 123.6 112 50.0
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 2.8e-21 106.7 75 69.3
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 6.9e-20 102.1 60 85.0
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 1.8e-07 60.8 156 32.1
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 7.5e-06 55.5 26 88.5
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 9.7e-06 55.1 50 54.0


User provided reference genes

Program Settings