Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 2.0e-69 265.8 148 100.0
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 4.3e-35 151.8 147 60.5
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 2.8e-34 149.1 148 61.5
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 4.7e-34 148.3 148 62.2
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 8.0e-34 147.5 149 59.7
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 1.8e-33 146.4 149 61.1
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 2.3e-33 146.0 150 59.3
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 2.3e-33 146.0 150 59.3
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 2.3e-33 146.0 146 57.5
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 5.2e-33 144.8 149 59.7
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 6.8e-33 144.4 142 61.3
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 6.8e-33 144.4 146 58.2
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 3.4e-32 142.1 147 58.5
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 2.9e-31 139.0 147 57.1
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 3.7e-31 138.7 146 58.2
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 8.3e-31 137.5 149 56.4
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.1e-30 137.1 146 58.9
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 1.4e-30 136.7 152 56.6
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 2.4e-30 136.0 146 52.1
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 5.4e-30 134.8 144 61.1
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 1.2e-29 133.7 149 57.7
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 1.2e-29 133.7 152 53.3
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 1.6e-29 133.3 150 57.3
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 1.6e-29 133.3 142 55.6
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 2.0e-29 132.9 148 57.4
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 2.0e-29 132.9 154 59.1
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 4.6e-29 131.7 145 55.2
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 4.6e-29 131.7 150 54.7
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 6.0e-29 131.3 149 57.7
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.3e-28 130.2 152 57.9
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 5.0e-28 128.3 149 56.4
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 3.3e-27 125.6 149 55.0
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 4.3e-27 125.2 149 55.0
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 9.5e-27 124.0 150 48.7
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 1.6e-26 123.2 153 50.3
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.6e-26 123.2 168 46.4
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 1.6e-26 123.2 153 52.9
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 3.6e-26 122.1 150 50.0
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 8.0e-26 120.9 147 50.3
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 1.4e-25 120.2 155 52.3
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 2.3e-25 119.4 152 48.7
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 1.2e-24 117.1 145 52.4
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 5.8e-24 114.8 147 49.0
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 8.3e-23 110.9 149 47.7
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 8.3e-23 110.9 152 47.4
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.1e-22 110.5 154 44.2
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.1e-22 110.5 150 50.0
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 1.4e-22 110.2 157 51.0
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 1.9e-22 109.8 147 49.7
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 7.0e-22 107.8 150 48.0
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 9.2e-22 107.5 151 45.7
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 1.2e-21 107.1 153 49.0
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 4.6e-21 105.1 152 47.4
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 7.8e-21 104.4 153 45.8
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 1.0e-20 104.0 147 42.9
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 1.3e-20 103.6 86 62.8
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 2.3e-20 102.8 147 42.9
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 8.6e-20 100.9 151 46.4
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 3.3e-19 99.0 151 43.7
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 4.3e-19 98.6 162 43.2
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 4.3e-19 98.6 148 49.3
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 9.5e-19 97.4 149 49.0
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 9.5e-19 97.4 88 56.8
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.2e-18 97.1 149 49.0
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.2e-18 97.1 150 44.7
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 1.2e-18 97.1 146 42.5
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 1.6e-18 96.7 146 43.2
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 2.1e-18 96.3 150 48.0
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 2.8e-18 95.9 85 58.8
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 4.7e-18 95.1 149 45.6
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 4.7e-18 95.1 149 47.0
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 6.2e-18 94.7 146 41.8
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 6.2e-18 94.7 146 45.9
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 8.1e-18 94.4 148 47.3
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 8.1e-18 94.4 148 47.3
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 8.1e-18 94.4 149 46.3
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 8.1e-18 94.4 146 43.2
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 1.4e-17 93.6 148 44.6
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 1.4e-17 93.6 148 44.6
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 2.3e-17 92.8 148 46.6
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 2.3e-17 92.8 148 46.6
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 3.1e-17 92.4 140 45.0
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 3.1e-17 92.4 146 45.9
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 3.1e-17 92.4 144 47.2
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 3.1e-17 92.4 120 51.7
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 4.0e-17 92.0 148 45.3
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 5.2e-17 91.7 152 43.4
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 5.2e-17 91.7 148 43.9
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 5.2e-17 91.7 144 47.2
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 1.2e-16 90.5 144 46.5
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 1.5e-16 90.1 148 45.3
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 1.5e-16 90.1 148 45.3
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 2.0e-16 89.7 151 38.4
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 2.0e-16 89.7 151 43.7
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 2.6e-16 89.4 148 45.9
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 4.4e-16 88.6 148 43.2
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 4.4e-16 88.6 148 43.2
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 4.4e-16 88.6 147 42.2
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 9.9e-16 87.4 154 41.6
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 1.3e-15 87.0 146 45.2
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 2.2e-15 86.3 149 40.3
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 2.9e-15 85.9 119 49.6
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 1.1e-14 84.0 150 44.0
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 1.9e-14 83.2 146 41.8
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 2.4e-14 82.8 150 40.7
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 9.2e-14 80.9 145 41.4
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 2.7e-13 79.3 121 47.9
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 4.6e-13 78.6 118 46.6
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 4.6e-13 78.6 157 39.5
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 1.3e-12 77.0 151 42.4
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 8.6e-12 74.3 136 42.6
SalBow1G3357 Salvia bowleyana HOM05D004507 ORTHO05D004874 1.5e-11 73.6 59 59.3
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.9e-11 73.2 150 37.3
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 2.5e-11 72.8 147 39.5
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 5.6e-11 71.6 151 36.4
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 7.3e-11 71.2 147 38.8
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 1.2e-10 70.5 64 51.6
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 4.7e-10 68.6 130 40.0
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 4.7e-10 68.6 140 38.6
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 6.2e-10 68.2 130 40.0
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 1.8e-09 66.6 151 37.1
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 3.1e-09 65.9 77 48.1
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 3.1e-09 65.9 123 40.7
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 6.8e-09 64.7 126 42.1
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.5e-08 63.5 127 40.9
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 4.4e-08 62.0 59 54.2
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 5.8e-08 61.6 127 40.2
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 7.6e-08 61.2 122 37.7
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 9.9e-08 60.8 121 36.4
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 2.9e-07 59.3 88 42.0
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 3.8e-07 58.9 81 40.7
unitig_37.g12687 Utricularia gibba HOM05D004507 ORTHO05D004874 4.9e-07 58.5 78 44.9
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.1e-06 57.4 114 37.7
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 3.2e-06 55.8 111 36.0
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 7.1e-06 54.7 87 36.8
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 7.1e-06 54.7 115 33.9
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 7.1e-06 54.7 115 33.9
BcaB01g04486 Brassica carinata HOM05D004507 ORTHO05D004874 9.2e-06 54.3 88 34.1
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 9.2e-06 54.3 114 31.6
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 9.2e-06 54.3 114 31.6
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 9.2e-06 54.3 114 31.6
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 9.2e-06 54.3 73 45.2
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 9.2e-06 54.3 140 35.0


User provided reference genes

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