Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033248 Camellia sinensis var. sinensis HOM05D007127 ORTHO05D008803 1.0e-23 112.5 54 100.0
CSS0046857 Camellia sinensis var. sinensis HOM05D007127 ORTHO05D008803 1.0e-23 112.5 54 100.0
Potri.001G467100 Populus trichocarpa HOM05D007127 ORTHO05D008803 4.4e-22 107.1 54 92.6
Atru.BG.133.p Acer truncatum HOM05D007127 ORTHO05D008803 7.5e-22 106.3 53 92.5
PSO210G6734 Papaver somniferum HOM05D007127 ORTHO05D008803 1.7e-21 105.1 54 92.6
Rhsim06G0232700 Rhododendron simsii HOM05D007127 ORTHO05D008803 1.7e-21 105.1 54 92.6
GSVIVG01014748001 Vitis vinifera HOM05D007127 ORTHO05D008803 2.2e-21 104.8 54 92.6
Ciclev10009425m.g Citrus clementina HOM05D007127 ORTHO05D008803 2.8e-21 104.4 54 90.7
DCAR_013258 Daucus carota HOM05D007127 ORTHO05D008803 2.8e-21 104.4 54 90.7
Glyma.18G074000 Glycine max HOM05D007127 ORTHO05D008803 2.8e-21 104.4 53 90.6
Actinidia10571 Actinidia chinensis HOM05D007127 ORTHO05D008803 3.7e-21 104.0 54 92.6
Lj6g0006308 Lotus japonicus HOM05D007127 ORTHO05D008803 4.8e-21 103.6 53 88.7
ATR0751G120 Amborella trichopoda HOM05D007127 ORTHO05D008803 6.3e-21 103.2 54 87.0
Cpa.g.sc12.104 Carica papaya HOM05D007127 ORTHO05D008803 1.1e-20 102.4 54 83.3
Nn1g07579 Nelumbo nucifera HOM05D007127 ORTHO05D008803 1.1e-20 102.4 54 88.9
Hund01879 Selenicereus undatus HOM05D007127 ORTHO05D008803 1.4e-20 102.1 54 88.9
FAN25G0358 Fragaria x ananassa HOM05D007127 ORTHO05D008803 1.8e-20 101.7 54 85.2
Gohir.A01G094000 Gossypium hirsutum HOM05D007127 ORTHO05D008803 1.8e-20 101.7 54 87.0
Gohir.D01G078500 Gossypium hirsutum HOM05D007127 ORTHO05D008803 1.8e-20 101.7 54 87.0
PGR031G3625 Punica granatum HOM05D007127 ORTHO05D008803 2.4e-20 101.3 54 87.0
Sabra16G0317000 Salix brachista HOM05D007127 ORTHO05D008803 2.4e-20 101.3 51 88.2
Aa31LG5G11910 Aethionema arabicum HOM05D007127 ORTHO05D008803 3.1e-20 100.9 54 88.9
AUR62017126 Chenopodium quinoa HOM05D007127 ORTHO05D008803 3.1e-20 100.9 54 85.2
AUR62035684 Chenopodium quinoa HOM05D007127 ORTHO05D008803 3.1e-20 100.9 54 85.2
Lj8A180T97 Lonicera japonica HOM05D007127 ORTHO05D008803 3.1e-20 100.9 54 87.0
Sp7g24510 Schrenkiella parvula HOM05D007127 ORTHO05D008803 3.1e-20 100.9 54 88.9
Haze_09871 Corylus avellana HOM05D007127 ORTHO05D008803 4.1e-20 100.5 54 85.2
RcHm_v2.0_Chr5g0075491 Rosa chinensis HOM05D007127 ORTHO05D008803 4.1e-20 100.5 54 83.3
RcHm_v2.0_Chr5g0075531 Rosa chinensis HOM05D007127 ORTHO05D008803 4.1e-20 100.5 54 83.3
Psat5g167080 Pisum sativum HOM05D007127 ORTHO05D008803 5.4e-20 100.1 53 84.9
QL08p002654 Quercus lobata HOM05D007127 ORTHO05D008803 5.4e-20 100.1 53 86.8
Thecc.07G007600 Theobroma cacao HOM05D007127 ORTHO05D008803 5.4e-20 100.1 54 85.2
MD03G1036700 Malus domestica HOM05D007127 ORTHO05D008803 7.0e-20 99.8 54 85.2
BcaC06g32738 Brassica carinata HOM05D007127 ORTHO05D008803 9.1e-20 99.4 54 87.0
BolC7t45986H Brassica oleracea HOM05D000491 ORTHO05D000359 9.1e-20 99.4 54 87.0
BraA03t14746Z Brassica rapa HOM05D000491 ORTHO05D000359 9.1e-20 99.4 54 87.0
CANSAT11G1343 Cannabis sativa HOM05D007127 ORTHO05D008803 9.1e-20 99.4 54 85.2
CARHR234140 Cardamine hirsuta HOM05D007127 ORTHO05D008803 9.1e-20 99.4 54 87.0
CsaV3_7G023830 Cucumis sativus L. HOM05D007127 ORTHO05D008803 9.1e-20 99.4 54 85.2
Thhalv10026261m.g Eutrema salsugineum HOM05D007127 ORTHO05D008803 9.1e-20 99.4 54 87.0
AL7G26340 Arabidopsis lyrata HOM05D007127 ORTHO05D008803 1.2e-19 99.0 54 85.2
AT4G26555 Arabidopsis thaliana HOM05D007127 ORTHO05D008803 1.2e-19 99.0 54 85.2
Carub.0007s1432 Capsella rubella HOM05D007127 ORTHO05D008803 1.2e-19 99.0 54 85.2
Eucgr.F03672 Eucalyptus grandis HOM05D007127 ORTHO05D008803 1.2e-19 99.0 54 85.2
Hma1.2p1_0193F.1_g083963 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 1.2e-19 99.0 53 84.9
TPR.G17936 Trifolium pratense HOM05D007127 ORTHO05D008803 1.2e-19 99.0 53 83.0
Gorai.002G103100 Gossypium raimondii HOM05D007127 ORTHO05D008803 1.6e-19 98.6 54 85.2
MBI14_g43080_MAGBIO Magnolia biondii HOM05D007127 ORTHO05D008803 1.6e-19 98.6 54 85.2
Oeu005465.2 Olea europaea HOM05D007127 ORTHO05D008803 1.6e-19 98.6 54 85.2
TWI39G0351 Tripterygium wilfordii HOM05D007127 ORTHO05D008803 1.6e-19 98.6 52 88.5
EL10Ac4g07544 Beta vulgaris HOM05D007127 ORTHO05D008803 2.0e-19 98.2 54 85.2
ClCG09G021550 Citrullus lanatus HOM05D007127 ORTHO05D008803 2.0e-19 98.2 54 85.2
Os02g0199300 Oryza sativa ssp. japonica HOM05D007127 ORTHO05D008803 2.7e-19 97.8 54 85.2
Peaxi162Scf00339g00004 Petunia axillaris HOM05D007127 ORTHO05D008803 2.7e-19 97.8 54 83.3
MSTRG.7016 Avicennia marina HOM05D007127 ORTHO05D008803 3.5e-19 97.4 54 83.3
Medtr3g060750 Medicago truncatula HOM05D007127 ORTHO05D008803 3.5e-19 97.4 53 83.0
CAN.G492.47 Capsicum annuum HOM05D007127 ORTHO05D008803 4.5e-19 97.1 53 83.0
Ca_14836_v3 Cicer arietinum L. HOM05D007127 ORTHO05D008803 4.5e-19 97.1 53 81.1
arahy.Tifrunner.gnm1.ann1.SL03ST Arachis hypogaea HOM05D007127 ORTHO05D008803 5.9e-19 96.7 53 83.0
SGA_v2.0_scaffold171G38842 Striga asiatica HOM05D007127 ORTHO05D008803 5.9e-19 96.7 54 83.3
MELO3C028909.2 Cucumis melo HOM05D007127 ORTHO05D008803 7.7e-19 96.3 51 84.3
SalBow8G4011 Salvia bowleyana HOM05D007127 ORTHO05D008803 7.7e-19 96.3 54 83.3
Cc05_g15330 Coffea canephora HOM05D007127 ORTHO05D008803 1.0e-18 95.9 54 81.5
HanXRQChr08g0232691 Helianthus annuus HOM05D007127 ORTHO05D008803 1.0e-18 95.9 54 83.3
vmacro11616 Vaccinium macrocarpon HOM05D007127 ORTHO05D008803 1.0e-18 95.9 52 86.5
THA.LOC104811685 Tarenaya hassleriana HOM05D007127 ORTHO05D008803 1.7e-18 95.1 54 83.3
Zm00001eb205840 Zea mays HOM05D007127 ORTHO05D008803 2.3e-18 94.7 54 83.3
FAN11G0992 Fragaria x ananassa HOM05D007127 ORTHO05D008803 2.9e-18 94.4 50 86.0
Lsat_1_v5_gn_5_2120 Lactuca sativa HOM05D007127 ORTHO05D008803 2.9e-18 94.4 51 84.3
Aqoxy1G04096 Aquilegia oxysepala HOM05D007127 ORTHO05D008803 5.0e-18 93.6 54 83.3
Migut.M01626 Erythranthe guttata HOM05D007127 ORTHO05D008803 5.0e-18 93.6 54 81.5
Solyc10g005870.4 Solanum lycopersicum HOM05D007127 ORTHO05D008803 5.0e-18 93.6 53 79.2
Sopen10g001820 Solanum pennellii HOM05D007127 ORTHO05D008803 5.0e-18 93.6 53 79.2
A03p56780 Brassica napus HOM05D000491 ORTHO05D008803 6.6e-18 93.2 50 88.0
C07p55280 Brassica napus HOM05D007127 ORTHO05D008803 6.6e-18 93.2 50 88.0
PGSC0003DMG400014371 Solanum tuberosum HOM05D007127 ORTHO05D008803 1.1e-17 92.4 53 77.4
arahy.Tifrunner.gnm1.ann1.I2ZJD2 Arachis hypogaea HOM05D007127 ORTHO05D008803 2.5e-17 91.3 56 78.6
Lalb_Chr15g0082331 Lupinus albus HOM05D007127 ORTHO05D008803 7.2e-17 89.7 73 63.0
SEGI_17483 Sequoiadendron giganteum HOM05D007127 ORTHO05D008803 1.2e-16 89.0 54 75.9
RcHm_v2.0_Chr5g0075521 Rosa chinensis HOM05D007127 ORTHO05D008803 4.7e-16 87.0 53 71.7
AagrBONN_evm.TU.Sc2ySwM_368.1220 Anthoceros agrestis HOM05D007127 ORTHO05D008803 6.1e-16 86.7 52 71.2
ECA246G1683 Erigeron canadensis HOM05D007127 ORTHO05D008803 6.1e-16 86.7 46 82.6
Dinv40887 Davidia involucrata HOM05D003312 ORTHO05D003792 4.0e-15 84.0 43 86.0
Pp3c5_10020 Physcomitrium patens HOM05D007127 ORTHO05D008803 5.2e-15 83.6 52 67.3
SMO356G0109 Selaginella moellendorffii HOM05D007127 ORTHO05D008803 1.5e-14 82.0 52 69.2
Glyma.08G333000 Glycine max HOM05D007127 ORTHO05D008803 4.9e-13 77.0 39 84.6
MCO15G274 Micromonas commoda HOM05D007127 ORTHO05D008803 5.9e-11 70.1 51 56.9
Actinidia30375 Actinidia chinensis HOM05D007127 ORTHO05D008803 7.8e-11 69.7 35 88.6
Cre02.g095450 Chlamydomonas reinhardtii HOM05D007127 ORTHO05D008803 6.1e-08 60.1 52 48.1
Cre07.g315700 Chlamydomonas reinhardtii HOM05D007127 ORTHO05D008803 2.3e-07 58.2 52 50.0
MCO15G113 Micromonas commoda HOM05D007127 ORTHO05D008803 4.0e-07 57.4 52 46.2
CBR_g31701 Chara braunii HOM05D007127 ORTHO05D008803 6.8e-07 56.6 50 48.0
VMungo0540G0661 Vigna mungo HOM05D007127 ORTHO05D008803 8.9e-07 56.2 28 85.7
COL.COLO4_07744 Corchorus olitorius HOM05D007127 ORTHO05D008803 1.2e-06 55.8 28 85.7
Hma1.2p1_0193F.1_g083966 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 1.2e-06 55.8 28 85.7
TAR627G0858 Trochodendron aralioides HOM05D007127 ORTHO05D008803 2.0e-06 55.1 31 80.6
Duzib213G0866 Durio zibethinus HOM05D007127 ORTHO05D008803 4.4e-06 53.9 28 82.1
Prupe.6G028700 Prunus persica HOM05D007127 ORTHO05D008803 7.5e-06 53.1 31 71.0
PRCOL_00001142 Prasinoderma coloniale HOM05D007127 ORTHO05D008803 9.8e-06 52.8 52 50.0


User provided reference genes

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