Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033232 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 2.7e-174 615.1 299 100.0
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.9e-135 486.1 293 84.6
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.7e-128 463.0 338 73.7
Rhsim04G0208100 Rhododendron simsii HOM05D013111 ORTHO05D013046 2.0e-44 183.7 254 43.7
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 7.3e-42 175.3 349 35.5
vmacro20887 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 1.1e-37 161.4 250 40.4
Rhsim11G0059800 Rhododendron simsii HOM05D013111 ORTHO05D013046 1.9e-29 134.0 254 37.0
Rhsim11G0040000 Rhododendron simsii HOM05D013111 ORTHO05D013046 6.2e-25 119.0 289 34.6
Rhsim04G0224100 Rhododendron simsii HOM05D013111 ORTHO05D013046 3.2e-21 106.7 171 42.1
vmacro22846 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 4.1e-21 106.3 217 34.6
Rhsim05G0135400 Rhododendron simsii HOM05D013111 ORTHO05D013046 9.2e-21 105.1 196 35.2
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 3.6e-17 93.2 246 32.5
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.1e-16 91.7 255 31.0
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.1e-13 81.6 237 30.8
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.1e-10 71.6 105 39.0
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 2.1e-09 67.4 89 41.6
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.6e-09 66.6 89 40.4
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.2e-09 65.9 89 40.4
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.4e-08 64.7 161 32.9
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.4e-08 63.9 169 29.6
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 5.3e-08 62.8 150 32.7
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 2.0e-07 60.8 123 31.7
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.6e-07 60.5 109 34.9
CSS0041179 Camellia sinensis var. sinensis HOM05D052153 ORTHO05D013046 5.8e-07 59.3 97 33.0
CSS0005929 Camellia sinensis var. sinensis HOM05D052153 ORTHO05D013046 9.9e-07 58.5 97 33.0
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.3e-06 58.2 94 37.2
Aqoxy7G03986 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 2.2e-06 57.4 104 33.7
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 2.2e-06 57.4 89 36.0
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 2.2e-06 57.4 115 32.2
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 3.8e-06 56.6 133 28.6


User provided reference genes

Program Settings