Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033225 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.2e-51 203.8 97 100.0
CSS0003590 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.8e-26 122.5 97 64.9
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.4e-24 113.6 62 82.3
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.5e-23 110.9 62 80.6
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-16 90.1 47 87.2
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.9e-13 78.2 62 54.8
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.9e-13 78.2 62 54.8
CSS0009319 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.9e-12 75.9 38 86.8
CSS0027839 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.9e-12 75.9 38 86.8
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.3e-12 74.7 60 55.0
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.3e-11 73.2 62 51.6
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-07 60.1 60 36.7
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-07 60.1 60 36.7
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-07 58.2 60 36.7
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.2e-07 57.4 60 35.0
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.3e-07 57.0 60 35.0
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.3e-07 57.0 60 35.0
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.3e-07 57.0 60 35.0
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-06 56.2 71 33.8
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.6e-06 56.2 60 36.7
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-06 55.8 57 40.4
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-06 55.5 61 41.0
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-06 55.1 57 35.1
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-06 54.7 57 38.6
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-06 54.7 61 39.3
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-06 54.7 57 38.6
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-06 54.7 57 38.6
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 4.6e-06 54.7 63 36.5
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.1e-06 54.3 57 38.6


User provided reference genes

Program Settings