Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 5.7e-141 504.6 324 100.0
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.0e-118 429.1 341 86.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.9e-81 305.8 335 67.2
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 9.8e-77 291.2 347 63.7
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 6.4e-76 288.5 332 56.0
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 7.3e-72 275.0 326 52.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 3.1e-70 269.6 364 59.6
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 5.2e-70 268.9 340 58.8
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 8.9e-70 268.1 327 64.2
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 2.0e-69 266.9 341 61.6
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 9.9e-69 264.6 357 57.7
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 1.4e-67 260.8 338 58.3
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 1.2e-66 257.7 347 53.0
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.1e-66 256.9 347 53.3
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 2.7e-66 256.5 331 56.5
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.0e-65 254.6 364 56.3
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 3.9e-65 252.7 336 59.2
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.1e-64 251.1 383 54.8
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 1.5e-64 250.8 358 58.4
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 2.5e-64 250.0 361 58.7
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 4.3e-64 249.2 325 55.1
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 4.3e-64 249.2 349 58.5
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.2e-63 247.7 333 56.5
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 2.1e-63 246.9 324 59.9
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 2.8e-63 246.5 351 60.4
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 3.6e-63 246.1 339 62.5
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 4.7e-63 245.7 352 57.4
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 8.1e-63 245.0 347 59.4
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.8e-62 243.8 370 54.9
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 2.4e-62 243.4 369 55.6
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 5.2e-62 242.3 346 53.8
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 2.0e-61 240.4 360 56.7
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 5.8e-61 238.8 351 57.8
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.2e-60 236.9 344 54.4
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 4.9e-60 235.7 363 52.1
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 8.4e-60 235.0 325 58.2
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 1.1e-59 234.6 360 56.4
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.4e-59 234.2 346 56.1
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.9e-59 233.8 335 58.5
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.2e-59 233.0 342 54.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 9.3e-59 231.5 356 55.6
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.2e-58 231.1 325 56.9
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 2.7e-58 229.9 375 52.5
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 4.6e-58 229.2 364 55.2
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 4.6e-58 229.2 347 55.0
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 1.3e-57 227.6 347 56.5
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.3e-57 227.6 347 57.1
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.7e-57 227.3 341 57.5
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.3e-57 226.9 348 53.7
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 6.6e-57 225.3 356 55.3
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 8.7e-57 224.9 341 56.3
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.1e-56 224.6 332 59.0
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 1.5e-56 224.2 366 51.4
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.5e-56 224.2 330 48.8
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 2.5e-56 223.4 337 56.1
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 4.3e-56 222.6 336 51.5
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 7.3e-56 221.9 347 53.9
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 7.3e-56 221.9 347 53.9
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 3.6e-55 219.5 325 54.2
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 3.6e-55 219.5 327 54.1
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 3.6e-55 219.5 325 54.2
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 6.2e-55 218.8 367 51.5
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 6.2e-55 218.8 325 45.2
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 8.1e-55 218.4 324 54.3
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.4e-54 217.6 329 56.2
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 1.4e-54 217.6 366 55.5
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 3.1e-54 216.5 376 52.4
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.2e-53 214.5 327 54.1
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.5e-53 214.2 325 44.6
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 3.4e-53 213.0 338 55.0
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 3.4e-53 213.0 348 52.6
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 2.2e-52 210.3 365 43.6
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 2.2e-52 210.3 376 54.0
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 1.1e-51 208.0 339 52.2
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 2.4e-51 206.8 334 54.2
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 2.4e-51 206.8 355 48.5
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 9.3e-51 204.9 355 52.4
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 1.6e-50 204.1 326 57.7
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 2.7e-50 203.4 369 52.0
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 3.5e-50 203.0 395 46.1
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 7.8e-50 201.8 378 49.7
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 3.9e-49 199.5 393 48.1
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 5.6e-48 195.7 324 48.8
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 7.3e-48 195.3 380 47.4
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 7.3e-48 195.3 347 49.0
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 2.1e-47 193.7 325 49.8
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 1.4e-46 191.0 208 53.4
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 5.3e-46 189.1 333 52.9
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 3.4e-45 186.4 146 67.1
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 1.3e-44 184.5 153 64.1
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 4.2e-43 179.5 285 56.1
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 1.2e-42 177.9 314 56.4
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 2.3e-41 173.7 283 57.2
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 4.5e-37 159.5 394 44.4
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.7e-36 157.5 122 66.4
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 8.4e-36 155.2 380 43.4
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 3.3e-32 143.3 111 63.1
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 4.3e-32 142.9 120 61.7
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 2.1e-31 140.6 144 54.9
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.1e-30 138.3 254 55.1
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 4.5e-29 132.9 285 48.4
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.7e-28 131.0 184 41.8
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 3.5e-26 123.2 151 48.3
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 3.3e-24 116.7 88 61.4
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 4.3e-24 116.3 193 38.9
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 9.7e-24 115.2 101 56.4
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 9.0e-22 108.6 283 45.9
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.0e-20 105.1 91 60.4
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 2.2e-20 104.0 97 55.7
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 6.5e-20 102.4 180 38.3
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 2.7e-18 97.1 409 35.2
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.1e-16 91.7 204 33.3
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-15 88.2 119 43.7
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 1.7e-15 87.8 215 52.1
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-13 80.1 102 44.1
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-13 80.1 102 44.1
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 4.5e-13 79.7 105 42.9
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.9e-13 79.3 78 53.8
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-12 77.8 104 44.2
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.7e-12 77.8 66 71.2
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-11 75.1 74 54.1
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.1e-11 75.1 65 69.2
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 1.4e-11 74.7 70 55.7
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 3.2e-11 73.6 85 48.2
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 5.5e-11 72.8 102 41.2
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 6.1e-10 69.3 113 38.1
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 6.1e-10 69.3 102 43.1
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 1.8e-09 67.8 100 44.0
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-09 67.0 105 41.0
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-09 67.0 105 41.0
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 5.1e-09 66.2 99 43.4
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 6.7e-09 65.9 40 75.0
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-09 65.9 91 44.0
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-09 65.9 102 42.2
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 8.8e-09 65.5 105 39.0
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-08 65.1 99 42.4
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-08 64.7 99 42.4
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 2.6e-08 63.9 115 37.4
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 3.3e-08 63.5 95 48.4
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 5.7e-08 62.8 95 40.0
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-07 60.8 99 40.4
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-07 60.8 99 41.4
arahy.Tifrunner.gnm1.ann1.8PL5QC Arachis hypogaea HOM05D008215 ORTHO05D004366 3.7e-07 60.1 100 39.0
arahy.Tifrunner.gnm1.ann1.BH3K81 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.8e-06 57.8 56 53.6
arahy.Tifrunner.gnm1.ann1.IYQ4QW Arachis hypogaea HOM05D008215 ORTHO05D004366 1.8e-06 57.8 56 53.6
arahy.Tifrunner.gnm1.ann1.TNWQ22 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.8e-06 57.8 56 53.6
arahy.Tifrunner.gnm1.ann1.53FFQK Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-06 57.4 60 48.3
arahy.Tifrunner.gnm1.ann1.65QQ6U Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-06 57.4 56 51.8
arahy.Tifrunner.gnm1.ann1.J7IPJF Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-06 57.4 60 48.3
arahy.Tifrunner.gnm1.ann1.N8KI2G Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-06 57.4 60 48.3
arahy.Tifrunner.gnm1.ann1.XH4RCS Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-06 57.4 60 48.3
arahy.Tifrunner.gnm1.ann1.KS76FR Arachis hypogaea HOM05D008215 ORTHO05D004366 3.1e-06 57.0 56 53.6
arahy.Tifrunner.gnm1.ann1.PGWD8S Arachis hypogaea HOM05D008215 ORTHO05D004366 4.1e-06 56.6 60 48.3
arahy.Tifrunner.gnm1.ann1.0B2DCJ Arachis hypogaea HOM05D008215 ORTHO05D004366 7.0e-06 55.8 56 51.8
arahy.Tifrunner.gnm1.ann1.0NID34 Arachis hypogaea HOM05D008215 ORTHO05D004366 7.0e-06 55.8 56 51.8
arahy.Tifrunner.gnm1.ann1.AZ2039 Arachis hypogaea HOM05D008215 ORTHO05D004366 7.0e-06 55.8 60 46.7
arahy.Tifrunner.gnm1.ann1.X4FCWR Arachis hypogaea HOM05D008215 ORTHO05D004366 7.0e-06 55.8 60 46.7
arahy.Tifrunner.gnm1.ann1.N6DDSD Arachis hypogaea HOM05D008215 ORTHO05D004366 9.1e-06 55.5 57 50.9
arahy.Tifrunner.gnm1.ann1.QL13TW Arachis hypogaea HOM05D008215 ORTHO05D004366 9.1e-06 55.5 60 46.7


User provided reference genes

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