Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033209 Camellia sinensis var. sinensis HOM05D008003 ORTHO05D010079 3.1e-99 365.2 186 100.0
Cc10_g03530 Coffea canephora HOM05D000499 ORTHO05D007471 1.7e-60 236.5 191 67.5
Hma1.2p1_0260F.1_g104350 Hydrangea macrophylla HOM05D008003 ORTHO05D010079 1.1e-56 223.8 190 65.8
Atru.chr13.573 Acer truncatum HOM05D008003 ORTHO05D010079 1.2e-55 220.3 189 65.1
QL02p007150 Quercus lobata HOM05D008003 ORTHO05D010079 6.1e-55 218.0 192 64.1
CiPaw.16G052800 Carya illinoinensis HOM05D008003 ORTHO05D010079 5.1e-54 214.9 191 63.9
Duzib116G0363 Durio zibethinus HOM05D008003 ORTHO05D010079 1.1e-53 213.8 188 64.4
Gohir.D05G200500 Gossypium hirsutum HOM05D008003 ORTHO05D010079 2.6e-53 212.6 190 61.6
Gorai.009G205800 Gossypium raimondii HOM05D008003 ORTHO05D010079 2.6e-53 212.6 190 61.6
Thecc.08G020300 Theobroma cacao HOM05D008003 ORTHO05D010079 2.6e-53 212.6 191 63.4
GSVIVG01009625001 Vitis vinifera HOM05D000499 ORTHO05D007471 4.4e-53 211.8 182 63.2
Haze_17611 Corylus avellana HOM05D008003 ORTHO05D010079 9.7e-53 210.7 190 63.2
MBI16_g13167_MAGBIO Magnolia biondii HOM05D008003 ORTHO05D010079 3.7e-52 208.8 192 60.9
COL.COLO4_26389 Corchorus olitorius HOM05D000499 ORTHO05D007471 8.2e-52 207.6 178 64.0
Cfa018459 Carpinus fangiana HOM05D008003 ORTHO05D010079 1.8e-51 206.5 190 62.1
Nitab4.5_0003884g0080 Nicotiana tabacum HOM05D008003 ORTHO05D010079 2.4e-51 206.1 189 61.4
Oeu004673.1 Olea europaea HOM05D008003 ORTHO05D010079 5.3e-51 204.9 190 61.6
HanXRQChr02g0045861 Helianthus annuus HOM05D008003 ORTHO05D010079 9.1e-51 204.1 187 59.9
Ciclev10002654m.g Citrus clementina HOM05D008003 ORTHO05D010079 1.2e-50 203.8 186 61.3
PGR031G0927 Punica granatum HOM05D008003 ORTHO05D010079 1.0e-49 200.7 191 61.3
Manes.05G165700 Manihot esculenta HOM05D008003 ORTHO05D010079 1.7e-49 199.9 186 60.8
FvH4_2g26081 Fragaria vesca HOM05D008003 ORTHO05D010079 3.8e-49 198.7 190 60.5
DCAR_020952 Daucus carota HOM05D000499 ORTHO05D007471 5.0e-49 198.4 181 60.8
RcHm_v2.0_Chr6g0294451 Rosa chinensis HOM05D008003 ORTHO05D010079 6.5e-49 198.0 190 61.1
SGA_v2.0_scaffold33G13535 Striga asiatica HOM05D008003 ORTHO05D010079 1.1e-48 197.2 190 60.5
Nn5g29446 Nelumbo nucifera HOM05D008003 ORTHO05D010079 2.5e-48 196.1 188 58.5
TWI36G0609 Tripterygium wilfordii HOM05D008003 ORTHO05D010079 2.5e-48 196.1 194 58.8
Peaxi162Scf00337g00617 Petunia axillaris HOM05D008003 ORTHO05D010079 9.4e-48 194.1 179 62.6
Duzib116G0025 Durio zibethinus HOM05D008003 ORTHO05D010079 1.6e-47 193.4 184 60.9
MD11G1306400 Malus domestica HOM05D008003 ORTHO05D010079 2.7e-47 192.6 205 57.6
Sabra02G0103400 Salix brachista HOM05D008003 ORTHO05D010079 1.0e-46 190.7 184 60.9
Aqoxy5G01740 Aquilegia oxysepala HOM05D008003 ORTHO05D010079 2.3e-46 189.5 190 56.8
CAN.G74.23 Capsicum annuum HOM05D008003 ORTHO05D010079 3.9e-46 188.7 191 58.6
Lsat_1_v5_gn_1_19420 Lactuca sativa HOM05D008003 ORTHO05D010079 5.2e-46 188.3 184 58.2
Cpa.g.sc64.35 Carica papaya HOM05D008003 ORTHO05D010079 1.1e-45 187.2 178 59.6
Potri.002G131500 Populus trichocarpa HOM05D008003 ORTHO05D010079 1.1e-45 187.2 193 59.6
Solyc04g008080.1 Solanum lycopersicum HOM05D008003 ORTHO05D010079 3.3e-45 185.7 189 56.6
CANSAT56G3107 Cannabis sativa HOM05D008003 ORTHO05D010079 4.4e-45 185.3 200 58.0
Lalb_Chr14g0370901 Lupinus albus HOM05D008003 ORTHO05D010079 5.7e-45 184.9 188 55.3
PSO170G4120 Papaver somniferum HOM05D008003 ORTHO05D010079 9.7e-45 184.1 194 54.6
Migut.N02677 Erythranthe guttata HOM05D000499 ORTHO05D007471 3.7e-44 182.2 192 56.2
SalBow1G6207 Salvia bowleyana HOM05D008003 ORTHO05D010079 4.8e-44 181.8 180 59.4
SalBow1G7493 Salvia bowleyana HOM05D008003 ORTHO05D010079 6.3e-44 181.4 180 59.4
Prupe.8G265000 Prunus persica HOM05D008003 ORTHO05D010079 8.2e-44 181.0 193 57.5
MD03G1292000 Malus domestica HOM05D008003 ORTHO05D010079 2.4e-43 179.5 205 53.7
PSO700G0197 Papaver somniferum HOM05D008003 ORTHO05D010079 9.1e-43 177.6 194 53.1
Nitab4.5_0012105g0050 Nicotiana tabacum HOM05D008003 ORTHO05D010079 1.2e-42 177.2 159 64.2
Sed0001684 Sechium edule HOM05D008003 ORTHO05D010079 4.5e-42 175.3 182 57.7
TPR.G12880 Trifolium pratense HOM05D008003 ORTHO05D010079 4.5e-42 175.3 184 57.1
Ca_17236_v3 Cicer arietinum L. HOM05D008003 ORTHO05D010079 7.7e-42 174.5 185 55.1
ECA247G3275 Erigeron canadensis HOM05D000264 ORTHO05D000152 1.3e-41 173.7 168 58.3
AUR62033864 Chenopodium quinoa HOM05D008003 ORTHO05D010079 1.7e-41 173.3 188 54.3
Medtr8g106450 Medicago truncatula HOM05D008003 ORTHO05D010079 8.5e-41 171.0 184 56.0
Glyma.05G242100 Glycine max HOM05D008003 ORTHO05D010079 3.2e-40 169.1 189 52.4
MELO3C012606.2 Cucumis melo HOM05D008003 ORTHO05D010079 4.7e-39 165.2 182 53.8
Gohir.A05G197500 Gossypium hirsutum HOM05D008003 ORTHO05D010079 1.4e-38 163.7 144 60.4
Lj2g0009988 Lotus japonicus HOM05D008003 ORTHO05D010079 1.4e-38 163.7 183 51.9
EL10As22g24222 Beta vulgaris HOM05D008003 ORTHO05D010079 1.8e-38 163.3 190 54.2
AUR62040074 Chenopodium quinoa HOM05D008003 ORTHO05D010079 4.0e-38 162.2 175 54.9
VMungo0251G2996 Vigna mungo HOM05D008003 ORTHO05D010079 5.2e-38 161.8 180 51.7
CsaV3_7G022920 Cucumis sativus L. HOM05D007284 ORTHO05D009303 1.6e-34 150.2 160 53.1
arahy.Tifrunner.gnm1.ann1.M7IFVU Arachis hypogaea HOM05D008003 ORTHO05D010079 2.7e-34 149.4 203 51.2
Phvul.002G325500 Phaseolus vulgaris HOM05D008003 ORTHO05D010079 2.7e-34 149.4 184 46.7
Phvul.002G325400 Phaseolus vulgaris HOM05D008003 ORTHO05D010079 4.5e-34 148.7 188 46.8
BcaB07g30606 Brassica carinata HOM05D008003 ORTHO05D010079 2.2e-33 146.4 196 43.9
PGSC0003DMG400029513 Solanum tuberosum HOM05D005814 ORTHO05D006821 2.2e-33 146.4 128 59.4
Medtr8g106405 Medicago truncatula HOM05D008003 ORTHO05D010079 2.9e-33 146.0 147 54.4
THA.LOC104803393 Tarenaya hassleriana HOM05D008003 ORTHO05D010079 2.9e-33 146.0 175 49.1
A02p27430 Brassica napus HOM05D008003 ORTHO05D010079 3.8e-33 145.6 197 44.2
BolC2t10386H Brassica oleracea HOM05D008003 ORTHO05D010079 3.8e-33 145.6 197 44.2
BraA02t07771Z Brassica rapa HOM05D008003 ORTHO05D010079 3.8e-33 145.6 197 44.2
Carub.0008s0637 Capsella rubella HOM05D008003 ORTHO05D010079 8.5e-33 144.4 196 44.4
BcaC03g16515 Brassica carinata HOM05D008003 ORTHO05D010079 1.1e-32 144.1 193 44.6
C02p43340 Brassica napus HOM05D008003 ORTHO05D010079 1.1e-32 144.1 193 44.6
AL8G18550 Arabidopsis lyrata HOM05D008003 ORTHO05D010079 1.9e-32 143.3 197 45.2
AT5G42655 Arabidopsis thaliana HOM05D008003 ORTHO05D010079 1.2e-31 140.6 197 44.2
CARHR181570 Cardamine hirsuta HOM05D000499 ORTHO05D007471 2.7e-31 139.4 196 43.9
ATR0733G062 Amborella trichopoda HOM05D008003 ORTHO05D010079 3.6e-31 139.0 184 47.3
Sp2g07120 Schrenkiella parvula HOM05D008003 ORTHO05D010079 1.4e-30 137.1 198 42.9
Thhalv10019186m.g Eutrema salsugineum HOM05D008003 ORTHO05D010079 4.0e-30 135.6 195 42.6
SEGI_14506 Sequoiadendron giganteum HOM05D008003 ORTHO05D010079 5.7e-29 131.7 191 45.5
Ah.05g169480 Amaranthus hybridus HOM05D008003 ORTHO05D010079 4.4e-21 105.5 174 44.3
Thhalv10003357m.g Eutrema salsugineum HOM05D008003 ORTHO05D010079 2.8e-20 102.8 116 46.6
Zm00001eb056600 Zea mays HOM05D008003 ORTHO05D010079 2.9e-17 92.8 203 36.5
Mapoly0009s0065 Marchantia polymorpha HOM05D000180 ORTHO05D000099 5.6e-08 62.0 89 41.6
SalBow1G0434 Salvia bowleyana HOM05D000180 ORTHO05D000099 5.6e-08 62.0 151 33.8
DCAR_019269 Daucus carota HOM05D000201 ORTHO05D000490 7.3e-08 61.6 133 34.6
Prupe.3G215500 Prunus persica HOM05D000180 ORTHO05D000099 7.3e-08 61.6 132 34.1
VMungo1127G1606 Vigna mungo HOM05D000180 ORTHO05D000099 9.5e-08 61.2 137 29.9
FAN14G0740 Fragaria x ananassa HOM05D000180 ORTHO05D000099 2.1e-07 60.1 123 33.3
Psat7g197840 Pisum sativum HOM05D000180 ORTHO05D000099 2.1e-07 60.1 143 31.5
CSS0046463 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 2.8e-07 59.7 113 36.3
ATR0810G295 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.7e-07 58.9 97 36.1
FvH4_6g42490 Fragaria vesca HOM05D000180 ORTHO05D000099 4.7e-07 58.9 157 29.9
FvH4_6g42930 Fragaria vesca HOM05D000180 ORTHO05D000099 4.7e-07 58.9 105 36.2
FAN14G4538 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.7e-07 58.9 105 36.2
CDE06G2788 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 1.4e-06 57.4 145 33.1
FAN05G0464 Fragaria x ananassa HOM05D000180 ORTHO05D000099 1.4e-06 57.4 82 37.8
RcHm_v2.0_Chr2g0158861 Rosa chinensis HOM05D000180 ORTHO05D000099 1.4e-06 57.4 82 40.2
CDE07G1183 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 1.8e-06 57.0 120 35.0
AUR62036507 Chenopodium quinoa HOM05D000013 ORTHO05D000011 1.8e-06 57.0 66 47.0
Mapoly0070s0018 Marchantia polymorpha HOM05D001508 ORTHO05D000099 1.8e-06 57.0 89 34.8
CDE06G2414 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 2.3e-06 56.6 130 35.4
Peaxi162Scf00769g00038 Petunia axillaris HOM05D000180 ORTHO05D000099 2.3e-06 56.6 109 34.9
Phvul.001G145600 Phaseolus vulgaris HOM05D000180 ORTHO05D000099 2.3e-06 56.6 113 35.4
Mapoly0078s0058 Marchantia polymorpha HOM05D014630 ORTHO05D000099 3.1e-06 56.2 145 34.5
ATR0810G102 Amborella trichopoda HOM05D000180 ORTHO05D000099 4.0e-06 55.8 118 33.9
CSS0008829 Camellia sinensis var. sinensis HOM05D000180 ORTHO05D000099 4.0e-06 55.8 170 30.0
FAN09G1602 Fragaria x ananassa HOM05D000180 ORTHO05D000099 4.0e-06 55.8 82 36.6
Mapoly0099s0036 Marchantia polymorpha HOM05D000180 ORTHO05D010079 4.0e-06 55.8 146 28.1
QL08p032297 Quercus lobata HOM05D000180 ORTHO05D000099 4.0e-06 55.8 147 30.6
SEGI_27732 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 4.0e-06 55.8 97 36.1
Sc13g0002470 Simmondsia chinensis HOM05D000180 ORTHO05D000099 4.0e-06 55.8 132 32.6
VMungo1383G3735 Vigna mungo HOM05D000180 ORTHO05D000099 4.0e-06 55.8 113 34.5
Ah.13g075610 Amaranthus hybridus HOM05D000180 ORTHO05D000099 5.2e-06 55.5 114 34.2
Migut.N01310 Erythranthe guttata HOM05D000180 ORTHO05D000099 5.2e-06 55.5 176 31.8
SEGI_32439 Sequoiadendron giganteum HOM05D000180 ORTHO05D000099 5.2e-06 55.5 105 34.3
SGA_v2.0_scaffold58G20416 Striga asiatica HOM05D000180 ORTHO05D000099 5.2e-06 55.5 143 31.5
TPR.G4666 Trifolium pratense HOM05D000180 ORTHO05D000099 5.2e-06 55.5 94 37.2
Lj9C390T8 Lonicera japonica HOM05D000180 ORTHO05D000099 6.8e-06 55.1 120 35.8
Potri.008G061400 Populus trichocarpa HOM05D000180 ORTHO05D000099 6.8e-06 55.1 102 40.2
SMO111G0080 Selaginella moellendorffii HOM05D001508 ORTHO05D001381 6.8e-06 55.1 130 33.8
ATR0810G039 Amborella trichopoda HOM05D000180 ORTHO05D000099 8.9e-06 54.7 104 34.6
arahy.Tifrunner.gnm1.ann1.PDJ41Q Arachis hypogaea HOM05D000180 ORTHO05D000099 8.9e-06 54.7 129 33.3
CDE03G0121 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 8.9e-06 54.7 83 42.2
CDE06G0402 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 8.9e-06 54.7 104 38.5
CDE08G0139 Ceratophyllum demersum HOM05D000180 ORTHO05D000099 8.9e-06 54.7 83 42.2
Migut.N01311 Erythranthe guttata HOM05D000180 ORTHO05D000099 8.9e-06 54.7 116 34.5
PGR031G0578 Punica granatum HOM05D001508 ORTHO05D001381 8.9e-06 54.7 149 28.9


User provided reference genes

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