Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 6.0e-86 320.9 167 100.0
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 3.8e-40 168.7 146 61.6
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 1.4e-34 150.2 140 58.6
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.4e-26 123.6 131 52.7
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 3.2e-23 112.5 124 48.4
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.0e-21 105.9 127 48.8
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 3.3e-20 102.4 141 44.0
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 4.8e-19 98.6 161 45.3
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.8e-19 98.6 120 50.0
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 6.3e-19 98.2 158 43.7
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 1.1e-18 97.4 143 42.7
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.4e-18 96.3 146 40.4
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 3.1e-18 95.9 128 43.0
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 5.3e-18 95.1 142 40.1
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 5.3e-18 95.1 142 40.1
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 5.3e-18 95.1 158 43.7
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 9.1e-18 94.4 141 47.5
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.2e-17 94.0 99 52.5
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 7.7e-17 91.3 124 44.4
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 8.5e-16 87.8 124 44.4
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 1.9e-15 86.7 118 48.3
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 2.5e-15 86.3 141 39.7
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 2.5e-15 86.3 145 39.3
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 9.4e-15 84.3 143 41.3
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 9.4e-15 84.3 145 44.1
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 2.7e-14 82.8 148 35.8
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 2.7e-14 82.8 148 41.2
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 3.6e-14 82.4 141 39.0
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 4.7e-14 82.0 110 43.6
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 4.7e-14 82.0 150 38.7
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 4.7e-14 82.0 144 39.6
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 6.1e-14 81.6 145 38.6
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 8.0e-14 81.3 130 40.8
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 8.0e-14 81.3 139 40.3
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 1.0e-13 80.9 98 43.9
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.0e-13 80.9 138 42.0
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 1.8e-13 80.1 149 42.3
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 6.7e-13 78.2 151 35.1
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 6.7e-13 78.2 130 41.5
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 3.3e-12 75.9 144 42.4
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 9.7e-12 74.3 123 41.5
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.3e-11 73.9 141 39.0
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 2.2e-11 73.2 144 40.3
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 2.2e-11 73.2 149 36.9
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 2.4e-10 69.7 95 43.2
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 3.1e-10 69.3 93 38.7
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 4.1e-10 68.9 130 36.2
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.2e-09 67.4 150 34.7
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.6e-09 67.0 112 35.7
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 1.6e-09 67.0 126 38.1
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 1.6e-09 67.0 107 37.4
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.0e-09 66.6 130 36.9
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.0e-09 66.6 75 48.0
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 2.0e-09 66.6 153 32.7
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 7.7e-09 64.7 75 44.0
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.7e-08 63.5 151 31.8
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 1.7e-08 63.5 84 42.9
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.2e-08 63.2 129 37.2
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 2.9e-08 62.8 128 34.4
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 5.0e-08 62.0 114 35.1
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 1.9e-07 60.1 123 40.7
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 4.2e-07 58.9 114 38.6
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 5.5e-07 58.5 147 34.7
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 9.4e-07 57.8 152 31.6
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 1.2e-06 57.4 79 43.0
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 1.6e-06 57.0 146 29.5
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 2.7e-06 56.2 96 37.5


User provided reference genes

Program Settings