Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 9.5e-113 410.2 212 100.0
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 8.2e-48 194.5 220 54.1
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 2.3e-42 176.4 215 48.8
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 4.8e-40 168.7 226 46.5
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 2.4e-39 166.4 211 47.9
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 2.6e-38 162.9 212 47.2
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 2.2e-37 159.8 207 44.9
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 1.1e-36 157.5 224 45.5
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 2.1e-35 153.3 182 48.4
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 6.1e-35 151.8 216 45.8
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.0e-34 149.4 206 45.1
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 5.2e-34 148.7 211 45.5
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 1.1e-33 147.5 212 44.8
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.3e-33 146.0 206 45.1
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 5.7e-33 145.2 225 41.3
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 3.7e-32 142.5 222 42.3
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 3.7e-32 142.5 215 45.6
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 4.8e-32 142.1 158 55.1
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 6.3e-32 141.7 206 44.2
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 6.3e-32 141.7 199 42.7
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.4e-31 140.6 207 45.9
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 4.1e-31 139.0 200 45.0
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 9.1e-31 137.9 220 40.9
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 1.6e-30 137.1 219 42.9
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 3.5e-30 136.0 207 40.6
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 4.5e-30 135.6 136 55.9
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 4.5e-30 135.6 219 41.6
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 7.7e-30 134.8 180 46.1
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 7.7e-30 134.8 205 42.0
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.2e-29 133.3 219 38.8
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 2.9e-29 132.9 210 41.4
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 5.5e-28 128.6 198 41.4
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 7.2e-28 128.3 213 40.8
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 1.2e-27 127.5 204 43.1
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.6e-27 127.1 204 40.2
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.6e-27 127.1 211 44.1
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.1e-27 126.7 202 39.6
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 6.1e-27 125.2 208 39.4
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 8.0e-27 124.8 198 39.4
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 8.0e-27 124.8 197 42.1
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.0e-26 124.4 208 40.4
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 1.8e-26 123.6 202 40.6
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.8e-26 123.6 204 39.2
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 5.2e-26 122.1 207 40.6
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 1.2e-25 120.9 207 38.6
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 9.8e-25 117.9 197 38.1
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 9.8e-25 117.9 220 36.8
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 1.3e-24 117.5 203 40.4
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.2e-24 116.7 205 38.5
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 6.3e-24 115.2 213 41.3
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.1e-23 114.4 201 37.8
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 1.4e-23 114.0 205 36.6
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 2.4e-23 113.2 198 39.4
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 7.0e-23 111.7 158 39.9
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 7.0e-23 111.7 166 42.2
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 9.1e-23 111.3 163 41.1
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.6e-22 110.5 202 37.6
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 1.6e-22 110.5 217 35.5
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 2.0e-22 110.2 209 37.3
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 2.7e-22 109.8 206 35.0
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 3.5e-22 109.4 199 39.2
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 4.5e-22 109.0 96 52.1
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 5.9e-22 108.6 183 36.1
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 5.9e-22 108.6 195 39.5
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 5.9e-22 108.6 111 54.1
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 5.9e-22 108.6 111 54.1
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 7.7e-22 108.2 191 39.3
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.0e-21 107.8 195 39.5
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 1.3e-21 107.5 186 40.9
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 1.7e-21 107.1 218 38.1
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 2.2e-21 106.7 174 38.5
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 2.2e-21 106.7 202 38.6
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.2e-21 106.7 195 39.0
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 2.9e-21 106.3 166 45.2
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 2.5e-20 103.2 183 35.5
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 2.5e-20 103.2 173 37.0
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 2.5e-20 103.2 183 35.5
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 2.5e-20 103.2 202 34.7
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 4.2e-20 102.4 184 35.3
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 4.2e-20 102.4 184 35.3
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 9.4e-20 101.3 133 44.4
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 1.2e-19 100.9 184 34.8
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 2.7e-19 99.8 173 36.4
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 6.1e-19 98.6 190 34.7
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 6.1e-19 98.6 148 43.9
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 6.1e-19 98.6 197 33.0
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 8.0e-19 98.2 102 48.0
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 1.4e-18 97.4 201 34.8
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 3.0e-18 96.3 134 47.0
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 6.8e-18 95.1 201 33.3
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.2e-17 94.4 124 43.5
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 2.0e-17 93.6 172 36.6
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 3.4e-17 92.8 170 38.8
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 4.4e-17 92.4 185 34.6
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 4.4e-17 92.4 105 52.4
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 4.4e-17 92.4 129 45.7
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 9.8e-17 91.3 201 33.3
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 2.2e-16 90.1 211 32.7
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.3e-16 88.6 91 50.5
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 3.1e-15 86.3 177 33.3
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 4.1e-15 85.9 159 35.2
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 5.4e-15 85.5 221 30.8
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 7.0e-15 85.1 184 32.1
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 7.0e-15 85.1 226 29.6
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.2e-14 84.3 89 49.4
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 1.0e-13 81.3 201 32.8
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 4.3e-12 75.9 99 42.4
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.2e-11 74.3 199 31.7
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 2.1e-11 73.6 201 30.8
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 2.1e-11 73.6 117 40.2
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 3.0e-10 69.7 122 35.2
Glyma.01G130700 Glycine max HOM05D006962 ORTHO05D008696 4.6e-06 55.8 123 36.6


User provided reference genes

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