Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 0.0e+00 1128.6 565 100.0
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 3.5e-231 805.1 494 84.0
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.9e-229 799.3 455 89.2
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 2.6e-226 788.9 445 88.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.5e-221 773.1 451 85.8
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 8.2e-220 767.3 417 91.4
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 3.4e-218 761.9 451 84.3
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 5.9e-218 761.1 451 84.3
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.2e-215 753.4 449 83.5
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 2.1e-215 752.7 452 82.3
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 2.7e-215 752.3 452 82.3
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.7e-215 752.3 478 81.0
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 6.1e-215 751.1 447 83.2
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.8e-214 749.6 446 84.1
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.3e-214 749.2 455 81.8
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 6.7e-214 747.7 452 81.4
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 1.1e-213 746.9 446 84.5
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 2.5e-213 745.7 452 83.4
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 7.4e-213 744.2 447 82.6
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 7.4e-213 744.2 452 81.4
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 9.7e-213 743.8 448 83.5
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 9.7e-213 743.8 452 81.4
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.6e-212 743.0 446 83.0
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 4.8e-212 741.5 453 80.4
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 1.1e-211 740.3 453 80.1
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.4e-211 740.0 476 78.4
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.8e-211 739.6 432 83.6
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.8e-211 739.6 449 82.9
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.4e-211 739.2 449 82.2
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 3.1e-211 738.8 451 82.0
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 9.0e-211 737.3 453 81.5
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.0e-210 736.1 446 81.6
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 3.4e-210 735.3 452 80.8
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 4.5e-210 734.9 482 76.8
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.9e-209 732.3 453 80.8
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 5.0e-209 731.5 498 78.3
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 8.5e-209 730.7 447 83.7
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.1e-208 730.3 451 78.9
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.1e-208 730.3 452 81.6
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.5e-208 729.2 453 80.4
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 2.5e-208 729.2 431 85.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 3.2e-208 728.8 465 78.7
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 3.6e-207 725.3 452 80.5
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 2.3e-206 722.6 451 78.0
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.0e-206 722.2 451 80.3
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.6e-205 719.2 451 79.6
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 4.4e-205 718.4 452 79.9
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 7.4e-205 717.6 451 80.0
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.7e-204 716.5 449 79.1
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 6.3e-204 714.5 456 78.1
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 8.2e-204 714.1 453 76.8
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.1e-203 712.2 470 75.3
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 5.3e-203 711.4 455 78.7
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 7.7e-202 707.6 450 77.3
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.7e-201 706.4 448 77.9
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 2.9e-201 705.7 455 77.8
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.9e-201 705.7 456 77.0
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 6.5e-201 704.5 455 75.4
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 2.5e-200 702.6 456 76.3
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.5e-200 702.6 455 77.6
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 4.2e-200 701.8 448 79.5
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.7e-199 699.1 448 75.7
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 4.7e-199 698.4 448 75.7
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.4e-198 696.8 448 77.7
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.8e-198 696.4 460 74.3
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 2.3e-198 696.0 448 75.7
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 5.7e-197 691.4 454 76.7
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 9.7e-197 690.6 447 74.7
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 9.7e-197 690.6 454 76.7
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.2e-196 689.5 407 86.5
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 2.2e-196 689.5 457 75.9
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 2.8e-196 689.1 447 74.3
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.1e-195 687.2 446 75.6
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.8e-195 686.4 461 75.3
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 4.1e-195 685.3 448 74.6
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 4.1e-195 685.3 442 76.9
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 7.0e-195 684.5 459 74.5
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 9.1e-195 684.1 454 75.3
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.0e-194 682.9 467 72.6
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 3.5e-194 682.2 447 74.7
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.5e-194 682.2 453 75.3
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 2.2e-193 679.5 437 76.0
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 2.2e-193 679.5 451 77.6
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 3.8e-193 678.7 459 73.2
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 5.0e-193 678.3 467 71.5
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 1.1e-192 677.2 447 74.0
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 5.5e-192 674.9 476 70.0
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 9.4e-192 674.1 456 72.8
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.7e-191 671.8 446 74.9
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.0e-190 670.6 456 75.7
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 2.0e-189 666.4 485 69.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 4.8e-188 661.8 494 71.1
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 3.5e-186 655.6 413 78.5
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 1.0e-185 654.1 461 70.3
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 4.7e-183 645.2 446 72.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.8e-179 633.3 390 77.4
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 7.0e-179 631.3 428 74.1
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.6e-178 630.2 413 74.1
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 4.4e-173 612.1 447 70.7
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 7.5e-173 611.3 465 68.6
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 3.7e-172 609.0 380 80.8
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 7.0e-171 604.7 447 69.1
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.6e-167 593.6 457 66.3
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.2e-166 588.6 320 90.0
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 2.9e-156 556.2 432 63.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 6.4e-156 555.1 427 63.2
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.3e-153 547.4 431 61.7
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 2.3e-150 536.6 437 62.5
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.1e-143 513.5 427 58.3
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 4.0e-134 482.6 455 59.6
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 3.8e-132 476.1 276 81.2
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 7.9e-122 441.8 446 58.7
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 3.2e-115 419.9 435 47.6
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 3.5e-106 389.8 426 49.5
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 5.3e-102 375.9 315 62.5
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 2.2e-100 370.5 370 56.5
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 5.0e-92 342.8 182 90.1
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.0e-84 318.5 391 43.2
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 5.2e-57 226.5 338 43.5
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 4.4e-56 223.4 189 67.2
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.7e-55 221.5 378 39.9
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.1e-54 218.8 108 91.7
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.7e-47 194.9 359 38.4
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.5e-43 181.8 124 77.4
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 8.0e-42 176.0 126 75.4
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 6.4e-39 166.4 137 64.2
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 4.6e-29 133.7 80 70.0
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 1.0e-28 132.5 126 54.0
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.2e-24 119.0 102 64.7
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.7e-23 115.2 83 67.5
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 1.1e-22 112.5 73 67.1
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 9.2e-22 109.4 192 32.8
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 5.1e-20 103.6 74 66.2
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.5e-19 102.1 70 70.0
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 5.6e-19 100.1 103 57.3
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 4.0e-17 94.0 68 64.7
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 4.4e-16 90.5 102 52.9
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 1.7e-15 88.6 56 80.4


User provided reference genes

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