Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 1.1e-74 283.1 136 100.0
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 4.3e-50 201.4 136 76.5
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 1.6e-49 199.5 136 77.2
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 1.5e-47 193.0 136 75.7
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 4.9e-46 188.0 136 74.3
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 3.9e-43 178.3 136 69.9
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 4.8e-33 144.8 116 67.2
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 1.2e-20 103.6 88 64.8
CsaV3_6G018510 Cucumis sativus L. HOM05D012847 ORTHO05D014920 1.4e-16 90.1 53 83.0
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 3.1e-16 89.0 143 44.8
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 3.4e-15 85.5 79 55.7
A05p22320 Brassica napus HOM05D012847 ORTHO05D020225 4.5e-15 85.1 48 83.3
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 1.0e-14 84.0 63 71.4
A05p22380 Brassica napus HOM05D000920 ORTHO05D010211 3.8e-14 82.0 70 60.0
BcaC08g42807 Brassica carinata HOM05D012847 ORTHO05D014920 5.0e-14 81.6 50 78.0
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 5.0e-14 81.6 143 43.4
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 8.5e-14 80.9 114 45.6
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 9.4e-13 77.4 116 46.6
A05p22300 Brassica napus HOM05D000920 ORTHO05D003704 2.1e-12 76.3 95 46.3
C02p52920 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-11 73.9 47 74.5
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 1.4e-11 73.6 115 43.5
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 5.1e-11 71.6 71 56.3
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 6.7e-11 71.2 111 46.8
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 6.7e-11 71.2 60 66.7
A05p22060 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-10 70.5 48 70.8
EL10As7g23717 Beta vulgaris HOM05D012847 ORTHO05D014920 9.7e-10 67.4 45 73.3
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 3.7e-09 65.5 72 52.8
CBR_g56703 Chara braunii HOM05D010018 ORTHO05D004854 6.3e-09 64.7 86 46.5
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 1.1e-08 63.9 145 35.2
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 1.1e-08 63.9 111 42.3
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 2.4e-08 62.8 31 93.5
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 3.1e-08 62.4 159 37.1
CBR_g51345 Chara braunii HOM05D010423 ORTHO05D010128 7.0e-08 61.2 75 49.3
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 7.0e-08 61.2 85 43.5
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 7.0e-08 61.2 85 43.5
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 9.1e-08 60.8 109 42.2
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 9.1e-08 60.8 109 42.2
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 1.2e-07 60.5 76 51.3
Sopen00g004830 Solanum pennellii HOM05D031495 ORTHO05D014920 2.0e-07 59.7 80 48.8
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 2.6e-07 59.3 30 93.3
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 2.6e-07 59.3 30 93.3
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 2.6e-07 59.3 30 93.3
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.6e-07 59.3 30 93.3
Zm00001eb262330 Zea mays HOM05D010106 ORTHO05D000626 3.4e-07 58.9 75 49.3
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 7.7e-07 57.8 30 90.0
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 7.7e-07 57.8 30 90.0
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 7.7e-07 57.8 30 90.0
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 7.7e-07 57.8 30 90.0
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 1.7e-06 56.6 29 93.1
Zm00001eb263490 Zea mays HOM05D010106 ORTHO05D014920 2.9e-06 55.8 79 48.1
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 8.5e-06 54.3 73 45.2


User provided reference genes

Program Settings