Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 1.6e-225 785.8 396 100.0
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.4e-189 666.4 386 86.0
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 1.7e-187 659.4 386 84.2
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 2.7e-185 652.1 402 80.8
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 3.0e-184 648.7 386 83.2
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 3.1e-181 638.6 386 81.1
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 3.1e-181 638.6 386 81.1
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 1.5e-180 636.3 387 80.9
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 2.2e-179 632.5 396 79.0
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 3.8e-179 631.7 378 81.0
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 2.4e-178 629.0 385 79.5
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 2.4e-178 629.0 385 79.5
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 8.7e-176 620.5 386 79.5
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.5e-175 619.8 385 79.5
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.5e-175 619.0 383 78.6
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 2.5e-175 619.0 378 80.7
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 3.3e-175 618.6 385 79.2
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 4.3e-175 618.2 387 77.8
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 5.6e-175 617.8 386 80.1
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 5.6e-175 617.8 385 80.0
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 9.6e-175 617.1 386 79.3
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 1.6e-174 616.3 378 80.4
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 2.8e-174 615.5 385 79.2
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 2.8e-174 615.5 385 79.2
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 3.6e-174 615.1 386 79.0
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 1.1e-173 613.6 380 80.8
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 2.0e-172 609.4 385 77.1
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 2.6e-172 609.0 386 78.8
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.3e-171 606.7 382 78.0
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 2.9e-171 605.5 393 77.1
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 1.1e-170 603.6 380 77.6
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 3.2e-170 602.1 394 75.6
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 9.3e-170 600.5 381 78.5
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 9.3e-170 600.5 383 78.3
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 1.0e-168 597.0 386 76.9
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.0e-168 597.0 388 76.3
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.3e-168 596.7 383 77.0
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 1.7e-168 596.3 385 76.1
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 1.7e-168 596.3 388 75.0
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 2.3e-168 595.9 386 76.7
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 6.6e-168 594.3 394 75.4
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 1.9e-167 592.8 386 74.1
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 3.3e-167 592.0 395 75.4
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 5.6e-167 591.3 389 75.1
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 7.3e-167 590.9 386 74.6
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 9.6e-167 590.5 385 77.1
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 1.6e-166 589.7 384 74.7
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 2.1e-166 589.3 387 74.9
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 3.6e-166 588.6 383 76.2
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 3.6e-166 588.6 386 73.3
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 6.2e-166 587.8 391 73.7
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.1e-165 587.0 381 75.6
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.1e-165 587.0 390 75.4
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.8e-165 586.3 390 74.4
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 3.1e-165 585.5 384 75.8
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 9.0e-165 583.9 388 73.7
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 1.2e-164 583.6 386 73.3
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 3.4e-164 582.0 386 74.6
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 9.9e-164 580.5 386 73.1
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 8.4e-163 577.4 383 77.5
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 1.4e-162 576.6 387 74.4
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 2.4e-162 575.9 379 74.4
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 4.6e-161 571.6 518 59.8
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 1.3e-160 570.1 379 72.6
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 1.3e-160 570.1 380 72.1
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 4.3e-159 565.1 384 72.9
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 2.1e-158 562.8 384 72.1
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 2.8e-158 562.4 380 72.1
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 2.8e-158 562.4 380 72.1
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 2.8e-158 562.4 382 73.0
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 4.8e-158 561.6 384 73.2
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 1.8e-157 559.7 386 71.0
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 2.4e-157 559.3 382 70.7
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 9.0e-157 557.4 385 70.6
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 9.0e-157 557.4 385 69.9
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 5.8e-156 554.7 385 70.4
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 2.9e-155 552.4 378 70.1
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 6.4e-155 551.2 378 70.1
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 8.4e-155 550.8 390 69.7
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 4.2e-154 548.5 424 67.2
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 9.3e-154 547.4 384 70.6
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 2.5e-151 539.3 386 70.2
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 7.4e-151 537.7 383 70.2
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 9.6e-151 537.3 386 71.8
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 2.1e-150 536.2 379 70.7
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 1.1e-149 533.9 356 72.8
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 9.0e-149 530.8 347 76.1
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 2.6e-148 529.3 385 67.8
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 4.5e-148 528.5 384 68.8
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 7.6e-148 527.7 386 69.4
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.9e-147 525.0 353 74.8
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 5.5e-146 521.5 384 65.6
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 9.3e-146 520.8 385 66.8
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 6.0e-145 518.1 310 82.9
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 7.9e-145 517.7 381 67.2
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 1.3e-144 516.9 380 67.6
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.0e-139 500.7 313 78.9
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.6e-137 493.4 332 76.8
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 9.7e-135 484.2 292 80.8
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.9e-131 472.6 312 77.9
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.0e-131 471.9 292 78.8
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.6e-129 465.7 308 75.3
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 2.0e-127 459.9 385 63.6
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 2.5e-114 416.4 379 54.6
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 1.2e-113 414.1 381 54.6
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 6.7e-112 408.3 264 76.5
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.7e-110 403.7 404 51.5
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.2e-110 403.3 378 60.1
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 2.2e-107 393.3 234 82.9
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.5e-106 390.6 379 53.0
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.9e-106 390.2 381 51.4
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 3.4e-103 379.4 266 71.1
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 1.2e-95 354.4 235 77.0
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 4.1e-93 345.9 268 64.6
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 4.4e-71 272.7 221 62.0
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 6.8e-64 248.8 153 83.0
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 1.2e-63 248.1 148 78.4
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 1.2e-55 221.5 391 34.5
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 2.2e-54 217.2 428 35.5
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.2e-52 211.5 152 65.8
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 7.8e-52 208.8 424 33.7
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 7.6e-47 192.2 115 80.9
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 4.6e-36 156.4 110 66.4
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 1.0e-30 138.7 183 42.6
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 4.1e-24 116.7 147 49.7
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 4.1e-24 116.7 155 43.2
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 1.3e-22 111.7 66 81.8
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.9e-22 110.5 219 37.4
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 3.2e-21 107.1 91 61.5
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 3.3e-18 97.1 68 70.6
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 2.9e-14 84.0 112 42.0
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 8.5e-14 82.4 70 55.7
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 2.6e-10 70.9 36 91.7
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 5.7e-10 69.7 75 46.7
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 8.2e-09 65.9 134 34.3
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 3.1e-08 63.9 36 83.3
SMO163G0069 Selaginella moellendorffii HOM05D020292 ORTHO05D007481 5.0e-06 56.6 82 39.0


User provided reference genes

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