Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 6.9e-167 590.5 286 100.0
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 4.7e-147 524.6 286 90.9
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 4.7e-115 418.3 274 73.7
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 4.4e-105 385.2 271 70.5
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 4.6e-102 375.2 277 67.9
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 1.9e-100 369.8 272 69.1
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 1.6e-99 366.7 273 65.9
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 2.8e-99 365.9 278 65.5
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 4.0e-98 362.1 273 64.5
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 6.8e-98 361.3 272 68.4
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 8.9e-98 360.9 272 65.4
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 3.7e-96 355.5 276 63.8
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 3.7e-96 355.5 277 66.4
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 3.7e-96 355.5 254 69.7
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 1.1e-95 354.0 274 61.3
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 2.4e-95 352.8 264 66.7
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 3.2e-95 352.4 274 64.6
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 5.4e-95 351.7 274 64.2
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 9.2e-95 350.9 274 62.0
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 1.2e-94 350.5 283 62.5
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 3.5e-94 349.0 273 64.8
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 7.8e-94 347.8 273 64.5
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 1.0e-93 347.4 279 61.6
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 3.9e-93 345.5 279 61.3
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 3.9e-93 345.5 270 61.1
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 5.1e-93 345.1 273 64.1
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 8.6e-93 344.4 274 62.8
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 1.1e-92 344.0 274 63.5
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 1.1e-92 344.0 273 64.8
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 1.5e-92 343.6 283 61.8
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 1.5e-92 343.6 275 63.3
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 1.9e-92 343.2 272 62.9
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 5.6e-92 341.7 287 62.0
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 5.6e-92 341.7 274 59.5
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 7.3e-92 341.3 273 63.0
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 9.6e-92 340.9 273 62.6
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 1.6e-91 340.1 273 62.6
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 1.6e-91 340.1 274 61.3
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 2.1e-91 339.7 273 63.7
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 2.1e-91 339.7 268 65.3
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 2.8e-91 339.3 275 60.7
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 8.1e-91 337.8 274 61.3
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 3.1e-90 335.9 270 61.9
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 4.0e-90 335.5 269 62.1
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 4.0e-90 335.5 276 63.0
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 5.2e-90 335.1 273 60.8
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 1.2e-89 334.0 266 62.8
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 1.5e-89 333.6 285 60.0
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 4.4e-89 332.0 262 64.1
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 7.6e-89 331.3 278 62.2
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 8.4e-88 327.8 273 60.4
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 1.9e-87 326.6 272 61.8
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 4.2e-87 325.5 261 62.8
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 4.2e-87 325.5 270 60.0
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 5.4e-87 325.1 273 59.0
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 2.1e-86 323.2 300 54.3
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 1.0e-85 320.9 266 63.2
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 1.7e-85 320.1 270 60.7
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 6.6e-85 318.2 262 58.4
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 1.9e-84 316.6 269 56.9
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 7.3e-84 314.7 258 62.8
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 9.6e-84 314.3 230 70.9
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 4.8e-83 312.0 270 58.9
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 2.4e-82 309.7 264 59.5
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 1.9e-79 300.1 270 57.4
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.2e-78 297.4 229 68.1
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 7.9e-78 294.7 270 55.2
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 6.6e-77 291.6 269 57.2
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 8.7e-77 291.2 258 60.5
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 3.3e-76 289.3 243 61.3
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 1.2e-73 280.8 283 57.6
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 8.4e-72 274.6 225 64.9
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 5.1e-69 265.4 271 52.8
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 5.6e-68 261.9 288 52.4
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 4.0e-66 255.8 270 50.4
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 4.6e-62 242.3 221 57.9
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 9.6e-60 234.6 182 64.8
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 1.4e-58 230.7 378 40.5
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 5.0e-56 222.2 214 54.7
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 2.5e-55 219.9 281 42.7
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 3.2e-55 219.5 271 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 2.5e-52 209.9 202 54.0
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 9.7e-52 208.0 271 45.0
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.3e-51 207.6 242 45.5
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 2.4e-42 176.8 283 39.9
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 6.9e-42 175.3 210 45.2
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 2.3e-29 133.7 112 62.5
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 9.4e-23 111.7 168 41.7
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 3.6e-22 109.8 123 49.6
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 3.0e-21 106.7 79 67.1
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 2.9e-16 90.1 66 65.2
Hma1.2p1_0785F.1_g217410 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.9e-15 87.4 56 69.6
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 3.2e-15 86.7 81 53.1
Glyma.19G060100 Glycine max HOM05D007625 ORTHO05D009738 7.8e-09 65.5 72 50.0


User provided reference genes

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