Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032936 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 2.3e-240 835.1 410 100.0
CSS0034569 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 1.2e-191 673.3 425 82.1
CSS0019220 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 6.6e-187 657.5 422 80.6
CSS0027177 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 1.4e-181 639.8 423 79.0
CSS0023467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.0e-160 568.5 439 70.6
CSS0042100 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.5e-158 561.2 467 68.3
CSS0019983 Camellia sinensis var. sinensis HOM05D019504 ORTHO05D001602 1.7e-150 536.6 419 69.9
CSS0028975 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.3e-123 446.4 436 61.2
CSS0012880 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 4.1e-88 329.3 308 60.1
CSS0003895 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.6e-87 327.4 308 59.7
CSS0030247 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 7.8e-87 325.1 307 59.9
CSS0045752 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.0e-86 324.7 307 59.6
CSS0018784 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 5.0e-86 322.4 307 59.3
CSS0012227 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 6.6e-86 322.0 307 59.3
CSS0015520 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 8.6e-86 321.6 307 59.3
CSS0023629 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.1e-85 321.2 307 58.6
CSS0043466 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 1.5e-85 320.9 307 59.0
CSS0041665 Camellia sinensis var. sinensis HOM05D002010 ORTHO05D001602 5.6e-85 318.9 311 57.6
CSS0009559 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.8e-27 127.9 164 47.6
CSS0038372 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D022133 2.0e-10 71.2 146 30.1
CSS0025813 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D022133 3.5e-10 70.5 146 29.5
CSS0032227 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.5e-09 66.2 168 33.9
CSS0043873 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.5e-09 66.2 168 33.9
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.1e-07 61.2 186 33.3
CSS0040721 Camellia sinensis var. sinensis HOM05D000279 ORTHO05D000957 6.1e-07 59.7 187 25.1
Rhsim05G0177400 Rhododendron simsii HOM05D000279 ORTHO05D022133 6.1e-07 59.7 155 27.1
vmacro20016 Vaccinium macrocarpon HOM05D019504 ORTHO05D022133 4.0e-06 57.0 181 24.9
Rhsim05G0178600 Rhododendron simsii HOM05D000279 ORTHO05D000957 6.7e-06 56.2 166 24.1
Rhsim05G0178500 Rhododendron simsii HOM05D000279 ORTHO05D000957 8.8e-06 55.8 97 30.9


User provided reference genes

Program Settings