Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032935 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D005026 7.0e-136 487.3 241 100.0
CSS0046565 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.1e-19 101.3 95 60.0
CSS0002013 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 9.1e-19 98.2 97 59.8
CSS0004500 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.6e-18 96.7 91 60.4
CSS0042068 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.1e-16 91.3 93 54.8
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.1e-15 87.0 95 52.6
CSS0028402 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.2e-09 67.0 77 50.6
Atru.chr3.1699 Acer truncatum HOM05D000007 ORTHO05D000017 5.0e-09 65.9 90 40.0
QL08p017442 Quercus lobata HOM05D000007 ORTHO05D000017 8.5e-09 65.1 91 42.9
Atru.chr13.1239 Acer truncatum HOM05D000007 ORTHO05D000017 2.5e-08 63.5 87 40.2
FAN22G0210 Fragaria x ananassa HOM05D000007 ORTHO05D005026 7.2e-08 62.0 88 46.6
Solyc09g083230.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.2e-08 62.0 54 57.4
Sopen09g032150 Solanum pennellii HOM05D000007 ORTHO05D000017 7.2e-08 62.0 54 57.4
Atru.chr13.1253 Acer truncatum HOM05D000007 ORTHO05D000017 1.6e-07 60.8 91 39.6
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 2.1e-07 60.5 62 56.5
Atru.chr1.119 Acer truncatum HOM05D000007 ORTHO05D000017 2.7e-07 60.1 89 40.4
HanXRQChr07g0185881 Helianthus annuus HOM05D000007 ORTHO05D000017 3.6e-07 59.7 98 44.9
QL08p017454 Quercus lobata HOM05D000007 ORTHO05D000017 3.6e-07 59.7 89 42.7
FAN17G1529 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.7e-07 59.3 97 39.2
Prupe.4G140100 Prunus persica HOM05D000007 ORTHO05D000017 4.7e-07 59.3 102 37.3
vmacro00488 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 4.7e-07 59.3 54 57.4
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 6.1e-07 58.9 54 59.3
Peaxi162Scf00526g00073 Petunia axillaris HOM05D000007 ORTHO05D000017 6.1e-07 58.9 93 48.4
Atru.chr1.120 Acer truncatum HOM05D000007 ORTHO05D000017 1.0e-06 58.2 76 43.4
CAN.G1360.7 Capsicum annuum HOM05D000007 ORTHO05D000039 1.4e-06 57.8 99 40.4
FvH4_4g32891 Fragaria vesca HOM05D000007 ORTHO05D005026 1.4e-06 57.8 54 55.6
Nitab4.5_0000306g0270 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-06 57.8 106 38.7
Potri.008G199800 Populus trichocarpa HOM05D000007 ORTHO05D000017 1.4e-06 57.8 50 62.0
Potri.015G013500 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.4e-06 57.8 66 45.5
PGSC0003DMG400006090 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-06 57.8 102 39.2
vmacro08249 Vaccinium macrocarpon HOM05D000845 ORTHO05D001925 1.4e-06 57.8 45 62.2
Atru.chr2.2999 Acer truncatum HOM05D000007 ORTHO05D000017 1.8e-06 57.4 101 35.6
Gohir.A09G060100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.8e-06 57.4 97 39.2
Sabra15G0011100 Salix brachista HOM05D000007 ORTHO05D000039 1.8e-06 57.4 98 36.7
Sopen02g011430 Solanum pennellii HOM05D000007 ORTHO05D000017 2.3e-06 57.0 51 56.9
Sopen10g023390 Solanum pennellii HOM05D000007 ORTHO05D000017 2.3e-06 57.0 47 61.7
Nitab4.5_0000122g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.0e-06 56.6 72 45.8
Nitab4.5_0000898g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.0e-06 56.6 88 40.9
vmacro00490 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.0e-06 56.6 49 59.2
Gohir.D09G059300 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.0e-06 56.2 97 39.2
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 4.0e-06 56.2 42 69.0
Lsat_1_v5_gn_6_61400 Lactuca sativa HOM05D000007 ORTHO05D000017 4.0e-06 56.2 89 39.3
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 4.0e-06 56.2 53 60.4
Prupe.6G125500 Prunus persica HOM05D000007 ORTHO05D005026 4.0e-06 56.2 42 61.9
QL02p063538 Quercus lobata HOM05D000007 ORTHO05D000017 4.0e-06 56.2 42 66.7
PGSC0003DMG400017667 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.0e-06 56.2 42 69.0
PGSC0003DMG400021478 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.0e-06 56.2 51 56.9
CAN.G567.41 Capsicum annuum HOM05D000007 ORTHO05D000017 5.2e-06 55.8 50 62.0
Haze_13293 Corylus avellana HOM05D000007 ORTHO05D000039 5.2e-06 55.8 65 52.3
CAN.G567.56 Capsicum annuum HOM05D000007 ORTHO05D000017 6.8e-06 55.5 47 63.8
Gorai.006G073900 Gossypium raimondii HOM05D000007 ORTHO05D000017 6.8e-06 55.5 97 38.1
Nitab4.5_0004974g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.8e-06 55.5 72 50.0
Sc07g0006650 Simmondsia chinensis HOM05D000007 ORTHO05D000039 6.8e-06 55.5 72 43.1
PGSC0003DMG400003797 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.8e-06 55.5 88 37.5
PGSC0003DMG400029654 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.8e-06 55.5 51 58.8
Atru.chr3.1789 Acer truncatum HOM05D000007 ORTHO05D000017 8.8e-06 55.1 80 40.0
Actinidia35876 Actinidia chinensis HOM05D000007 ORTHO05D000017 8.8e-06 55.1 54 57.4
CAN.G500.31 Capsicum annuum HOM05D000007 ORTHO05D000017 8.8e-06 55.1 51 54.9
CAN.G626.7 Capsicum annuum HOM05D000006 ORTHO05D000017 8.8e-06 55.1 74 45.9
CAN.G767.51 Capsicum annuum HOM05D005506 ORTHO05D004172 8.8e-06 55.1 51 56.9
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 8.8e-06 55.1 91 41.8
QL09p021424 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-06 55.1 51 52.9
Solyc09g091220.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 8.8e-06 55.1 75 44.0
vmacro00497 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 8.8e-06 55.1 52 51.9


User provided reference genes

Program Settings