Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 4.2e-35 151.0 85 100.0
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 3.7e-23 111.3 61 86.9
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 4.0e-22 107.8 83 66.3
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 1.5e-21 105.9 61 82.0
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 3.4e-21 104.8 58 84.5
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 4.5e-21 104.4 61 80.3
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 4.5e-21 104.4 86 64.0
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 5.8e-21 104.0 85 61.2
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 1.0e-20 103.2 61 78.7
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 1.3e-20 102.8 56 83.9
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 2.9e-20 101.7 54 88.9
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 6.5e-20 100.5 54 85.2
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 8.4e-20 100.1 61 78.7
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 1.1e-19 99.8 54 81.5
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 1.1e-19 99.8 54 81.5
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 1.4e-19 99.4 74 67.6
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 1.4e-19 99.4 61 77.0
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 1.9e-19 99.0 61 73.8
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 3.2e-19 98.2 54 81.5
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 4.2e-19 97.8 61 75.4
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 4.2e-19 97.8 61 73.8
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 5.5e-19 97.4 54 85.2
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 5.5e-19 97.4 60 78.3
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 5.5e-19 97.4 61 73.8
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 5.5e-19 97.4 82 61.0
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 9.3e-19 96.7 52 86.5
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 1.6e-18 95.9 58 75.9
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 2.1e-18 95.5 56 78.6
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 2.7e-18 95.1 62 74.2
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 3.5e-18 94.7 62 74.2
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 6.0e-18 94.0 76 63.2
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 1.3e-17 92.8 78 57.7
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 1.3e-17 92.8 60 71.7
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 2.3e-17 92.0 53 77.4
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 3.0e-17 91.7 53 79.2
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 3.9e-17 91.3 83 56.6
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 6.7e-17 90.5 53 77.4
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 6.7e-17 90.5 53 77.4
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 6.7e-17 90.5 54 75.9
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 6.7e-17 90.5 54 74.1
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 1.5e-16 89.4 53 75.5
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 1.5e-16 89.4 53 75.5
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 1.5e-16 89.4 58 67.2
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 1.9e-16 89.0 58 69.0
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 1.9e-16 89.0 53 75.5
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 1.9e-16 89.0 75 60.0
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 1.9e-16 89.0 52 80.8
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 2.5e-16 88.6 54 74.1
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 4.3e-16 87.8 53 73.6
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 4.3e-16 87.8 61 70.5
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 9.7e-16 86.7 60 68.3
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 1.3e-15 86.3 59 64.4
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 2.2e-15 85.5 58 67.2
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 2.2e-15 85.5 83 57.8
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 2.8e-15 85.1 60 61.7
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 3.7e-15 84.7 79 60.8
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 6.3e-15 84.0 61 65.6
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 6.3e-15 84.0 57 64.9
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 6.3e-15 84.0 57 64.9
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 8.2e-15 83.6 54 66.7
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 8.2e-15 83.6 61 63.9
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 8.2e-15 83.6 58 67.2
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 8.2e-15 83.6 61 67.2
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 1.1e-14 83.2 46 80.4
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 1.4e-14 82.8 53 69.8
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 3.1e-14 81.6 55 65.5
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 4.1e-14 81.3 59 61.0
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 9.0e-14 80.1 58 60.3
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 1.2e-13 79.7 61 62.3
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 3.4e-13 78.2 41 82.9
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 3.4e-13 78.2 44 79.5
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 3.4e-13 78.2 61 60.7
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 4.5e-13 77.8 44 79.5
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 4.5e-13 77.8 42 81.0
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 4.5e-13 77.8 41 82.9
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 1.7e-12 75.9 44 77.3
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 1.7e-12 75.9 44 77.3
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 1.7e-12 75.9 44 77.3
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.7e-12 75.9 61 57.4
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.9e-12 75.1 65 63.1
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 5.0e-12 74.3 54 55.6
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 1.1e-11 73.2 52 63.5
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 4.2e-11 71.2 40 77.5
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 5.5e-11 70.9 42 73.8
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 7.2e-11 70.5 40 75.0
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 7.2e-11 70.5 72 52.8
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 7.2e-11 70.5 46 71.7
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 7.9e-10 67.0 57 57.9
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 1.8e-09 65.9 47 55.3
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 5.1e-09 64.3 39 71.8
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 3.3e-08 61.6 31 87.1
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 5.7e-08 60.8 37 70.3
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 2.8e-07 58.5 41 63.4
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 1.4e-06 56.2 54 57.4


User provided reference genes

Program Settings