Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 3.6e-94 348.2 173 100.0
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 7.1e-66 254.2 185 76.8
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 1.9e-63 246.1 179 73.2
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 2.4e-61 239.2 178 72.5
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.7e-59 233.0 179 69.8
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 3.8e-59 231.9 179 70.9
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 3.5e-57 225.3 179 68.2
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 6.0e-57 224.6 181 64.6
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 1.3e-56 223.4 181 69.6
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.8e-56 223.0 179 68.7
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 5.1e-56 221.5 184 67.9
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 6.7e-56 221.1 183 66.7
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 8.7e-56 220.7 179 65.4
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.1e-55 220.3 179 65.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.5e-55 219.9 179 65.4
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.5e-55 219.9 179 65.4
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 1.9e-55 219.5 181 66.3
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 3.3e-55 218.8 180 65.6
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 4.3e-55 218.4 179 67.0
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 7.4e-55 217.6 176 65.3
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.3e-54 216.9 180 65.6
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 1.3e-54 216.9 179 68.7
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 1.6e-54 216.5 179 63.7
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 1.6e-54 216.5 181 66.3
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 4.8e-54 214.9 179 64.8
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.1e-53 213.8 179 65.9
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 1.8e-53 213.0 179 64.2
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 2.4e-53 212.6 181 65.2
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 2.4e-53 212.6 176 65.3
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 4.1e-53 211.8 179 64.8
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 4.1e-53 211.8 179 64.2
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 6.9e-53 211.1 179 62.0
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 6.9e-53 211.1 181 68.0
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.2e-52 210.3 179 63.7
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.5e-52 209.9 182 61.5
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.5e-52 209.9 179 63.7
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 2.0e-52 209.5 179 63.7
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 2.6e-52 209.1 184 66.3
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 3.4e-52 208.8 181 64.1
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 3.4e-52 208.8 185 61.6
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 4.5e-52 208.4 179 62.6
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 5.8e-52 208.0 179 61.5
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 7.6e-52 207.6 179 61.5
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 1.3e-51 206.8 182 64.8
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 2.2e-51 206.1 188 60.6
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 3.8e-51 205.3 169 61.5
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.9e-50 203.0 181 61.3
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 2.5e-50 202.6 185 62.7
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 2.5e-50 202.6 184 60.9
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 7.1e-50 201.1 180 62.2
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 9.3e-50 200.7 169 60.9
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.6e-49 199.9 181 64.1
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 1.6e-49 199.9 181 60.2
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 2.1e-49 199.5 181 64.6
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 3.5e-49 198.7 181 60.8
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 4.6e-49 198.4 121 78.5
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 6.1e-49 198.0 179 61.5
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 6.1e-49 198.0 177 58.8
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 3.0e-48 195.7 175 61.7
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 5.1e-48 194.9 181 63.5
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 6.7e-48 194.5 201 55.7
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 8.7e-48 194.1 184 59.2
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 1.1e-47 193.7 181 63.5
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 1.1e-47 193.7 181 63.5
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 1.1e-47 193.7 155 65.8
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.1e-47 193.7 188 57.4
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 2.5e-47 192.6 183 60.1
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 2.5e-47 192.6 183 60.1
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 5.7e-47 191.4 181 61.9
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 7.4e-47 191.0 184 59.2
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 7.4e-47 191.0 181 61.9
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 7.4e-47 191.0 181 61.9
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 7.4e-47 191.0 184 59.2
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 7.4e-47 191.0 184 59.2
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 7.4e-47 191.0 181 61.9
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 2.2e-46 189.5 181 60.8
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 2.2e-46 189.5 118 78.0
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 2.2e-46 189.5 185 61.1
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 2.8e-46 189.1 128 75.8
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 4.8e-46 188.3 184 59.2
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 6.3e-46 188.0 179 58.1
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.1e-45 187.2 157 65.0
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 1.1e-45 187.2 127 71.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 1.4e-45 186.8 174 58.6
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 1.4e-45 186.8 181 61.3
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 2.4e-45 186.0 119 78.2
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 3.1e-45 185.7 132 68.9
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 5.3e-45 184.9 170 58.8
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 9.0e-45 184.1 119 75.6
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 9.0e-45 184.1 184 59.2
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.2e-44 183.7 174 57.5
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 3.4e-44 182.2 185 58.9
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.3e-43 180.3 137 67.2
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 2.9e-43 179.1 112 75.9
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 4.2e-42 175.3 171 57.9
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 3.6e-41 172.2 188 56.4
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 5.1e-40 168.3 117 69.2
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 6.7e-40 167.9 116 68.1
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 7.4e-39 164.5 145 66.2
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 3.1e-37 159.1 126 62.7
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 1.7e-35 153.3 180 50.0
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.9e-34 149.8 180 49.4
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 2.2e-30 136.3 106 66.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 6.3e-30 134.8 94 69.1
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 5.0e-27 125.2 126 61.9
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 2.8e-22 109.4 178 43.3
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 2.8e-22 109.4 137 54.0
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 8.2e-22 107.8 113 56.6
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.8e-21 106.7 124 52.4
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.6e-20 102.8 102 58.8
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.1e-17 93.2 67 68.7
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 6.1e-17 91.7 58 70.7
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 4.8e-14 82.0 97 56.7


User provided reference genes

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