Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.1e-106 389.0 194 100.0
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.6e-64 249.2 170 76.5
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.4e-64 248.4 170 76.5
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 9.1e-62 240.7 170 74.7
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.6e-61 240.0 170 73.5
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.9e-60 235.7 170 73.5
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.1e-59 233.8 170 73.5
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.5e-59 233.4 170 73.5
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.5e-59 233.4 170 71.2
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 4.2e-59 231.9 170 71.2
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 4.2e-59 231.9 185 67.6
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 5.5e-59 231.5 170 70.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 5.5e-59 231.5 170 70.6
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 9.4e-59 230.7 194 65.5
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.2e-58 230.3 170 72.4
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.7e-58 229.2 170 70.6
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 2.7e-58 229.2 170 70.6
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 3.6e-58 228.8 171 71.3
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 6.1e-58 228.0 170 71.2
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 8.0e-58 227.6 170 69.4
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.4e-57 226.9 170 70.0
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.4e-57 226.9 170 71.2
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.8e-57 226.5 170 69.4
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 3.0e-57 225.7 171 69.0
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 4.0e-57 225.3 170 71.2
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 5.2e-57 224.9 170 68.2
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 6.8e-57 224.6 185 64.9
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 8.8e-57 224.2 170 70.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.2e-56 223.8 170 69.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 1.2e-56 223.8 170 68.2
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.5e-56 223.4 170 67.1
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.5e-56 223.4 170 69.4
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 2.6e-56 222.6 170 70.0
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.6e-56 222.6 170 68.2
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.4e-56 222.2 170 70.0
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.4e-56 222.2 194 61.9
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 4.4e-56 221.9 170 68.8
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 4.4e-56 221.9 170 70.0
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 4.4e-56 221.9 170 68.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 9.8e-56 220.7 170 70.0
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.3e-55 220.3 170 69.4
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.7e-55 219.9 170 68.2
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.7e-55 219.9 170 68.2
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.8e-55 219.2 168 68.5
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.8e-55 219.2 170 68.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.7e-55 218.8 170 68.2
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.7e-55 218.8 170 68.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 4.9e-55 218.4 199 60.3
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 6.3e-55 218.0 170 67.6
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 6.3e-55 218.0 170 68.8
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 8.3e-55 217.6 170 67.6
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 8.3e-55 217.6 170 67.6
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 8.3e-55 217.6 168 67.9
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.1e-54 217.2 170 67.6
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.1e-54 217.2 170 68.2
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.8e-54 216.5 170 67.6
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.8e-54 216.5 170 67.6
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.8e-54 216.5 166 68.7
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.1e-54 215.7 170 65.9
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.1e-54 215.7 170 67.1
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 4.1e-54 215.3 170 68.2
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.1e-54 215.3 170 67.1
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 7.0e-54 214.5 170 64.7
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.2e-53 213.8 170 65.3
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 1.6e-53 213.4 169 66.3
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.6e-53 213.4 176 65.3
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.6e-53 213.4 170 64.7
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 2.7e-53 212.6 170 65.9
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 1.7e-52 209.9 191 61.3
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 2.9e-52 209.1 171 63.7
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.8e-52 208.8 170 64.1
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.8e-52 208.8 170 65.3
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 5.0e-52 208.4 170 64.1
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 5.0e-52 208.4 170 64.7
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 8.6e-52 207.6 170 64.1
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.5e-51 206.1 185 60.0
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.3e-51 205.3 170 63.5
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 4.3e-51 205.3 171 63.7
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.6e-50 203.4 170 63.5
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.6e-50 203.4 170 63.5
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 8.0e-50 201.1 168 64.3
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.4e-49 200.3 170 61.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.3e-49 199.5 170 60.6
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 5.2e-49 198.4 170 60.6
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.2e-48 197.2 144 69.4
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 3.9e-44 182.2 190 53.2
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 3.3e-43 179.1 169 56.8
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 6.2e-42 174.9 175 54.9
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.3e-39 167.2 169 53.8
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.5e-35 152.9 139 59.7
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.1e-33 147.5 110 68.2
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.2e-32 144.1 165 47.9
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.4e-30 137.1 158 50.0
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.8e-25 120.2 184 42.4
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 5.1e-20 102.1 160 40.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.4e-17 93.2 84 52.4
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.2e-13 80.9 87 52.9
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 5.1e-12 75.5 139 33.8
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.8e-10 68.9 125 39.2


User provided reference genes

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