Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 4.7e-64 247.7 123 100.0
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 7.9e-35 150.6 128 67.2
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 3.9e-34 148.3 129 65.1
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 3.9e-34 148.3 123 66.7
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 1.5e-33 146.4 126 65.1
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 4.3e-33 144.8 123 69.1
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.6e-32 142.9 131 59.5
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.1e-31 140.2 131 62.6
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 5.8e-30 134.4 142 55.6
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.0e-29 133.7 122 59.0
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 1.0e-29 133.7 122 64.8
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 2.9e-29 132.1 125 60.0
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 2.9e-29 132.1 128 62.5
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.8e-29 131.7 122 60.7
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 4.9e-29 131.3 118 66.9
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 6.5e-29 131.0 116 64.7
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.1e-28 130.2 130 59.2
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-28 129.4 103 68.0
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-28 129.4 103 68.0
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.9e-28 129.4 121 62.8
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 3.2e-28 128.6 121 62.0
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.2e-28 128.3 111 62.2
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 5.5e-28 127.9 85 75.3
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.5e-28 127.9 111 64.0
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 5.5e-28 127.9 111 62.2
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.5e-28 127.9 111 62.2
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 7.1e-28 127.5 80 76.2
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 7.1e-28 127.5 134 54.5
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 7.1e-28 127.5 123 65.0
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 9.3e-28 127.1 123 58.5
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 9.3e-28 127.1 116 60.3
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.6e-27 126.3 123 62.6
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.7e-27 125.6 134 53.7
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 7.9e-27 124.0 126 58.7
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.8e-26 122.9 111 65.8
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 2.3e-26 122.5 91 69.2
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.3e-26 122.5 127 55.1
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.0e-26 122.1 122 58.2
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 3.9e-26 121.7 110 60.9
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 3.9e-26 121.7 80 76.2
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 5.1e-26 121.3 119 58.0
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 6.7e-26 120.9 122 58.2
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 8.7e-26 120.6 129 57.4
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 1.9e-25 119.4 120 56.7
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.5e-25 119.0 114 58.8
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 2.5e-25 119.0 102 60.8
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 5.7e-25 117.9 102 60.8
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 7.4e-25 117.5 128 55.5
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 7.4e-25 117.5 128 55.5
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 7.4e-25 117.5 128 55.5
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 7.4e-25 117.5 130 55.4
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 7.4e-25 117.5 99 64.6
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 7.4e-25 117.5 81 75.3
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 7.4e-25 117.5 99 67.7
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 7.4e-25 117.5 129 56.6
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 9.7e-25 117.1 85 71.8
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 9.7e-25 117.1 88 67.0
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.3e-24 116.7 112 57.1
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.6e-24 116.3 88 68.2
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 1.6e-24 116.3 124 53.2
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.2e-24 115.9 104 61.5
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.2e-24 115.9 90 70.0
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 2.2e-24 115.9 90 70.0
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.2e-24 115.9 90 70.0
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.8e-24 115.5 134 52.2
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 2.8e-24 115.5 119 58.8
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 2.8e-24 115.5 121 54.5
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 8.2e-24 114.0 112 58.9
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.1e-23 113.6 113 61.1
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 1.8e-23 112.8 94 66.0
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 2.4e-23 112.5 128 55.5
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 3.1e-23 112.1 112 52.7
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 4.1e-23 111.7 84 72.6
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 4.1e-23 111.7 82 68.3
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 5.3e-23 111.3 105 53.3
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 1.2e-22 110.2 84 71.4
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 1.2e-22 110.2 80 77.5
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 1.5e-22 109.8 96 59.4
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.0e-22 109.4 80 71.2
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.0e-22 109.4 103 60.2
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.0e-22 109.4 86 64.0
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 2.0e-22 109.4 83 63.9
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 2.6e-22 109.0 126 51.6
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 3.4e-22 108.6 89 61.8
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 7.6e-22 107.5 80 68.8
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.3e-21 106.7 95 60.0
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.3e-21 106.7 89 62.9
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.3e-21 106.7 122 52.5
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.7e-21 106.3 80 70.0
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.7e-21 106.3 80 63.8
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.7e-21 106.3 119 48.7
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.2e-21 105.9 77 67.5
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 5.0e-21 104.8 91 63.7
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 6.5e-21 104.4 75 69.3
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 6.5e-21 104.4 88 60.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 8.5e-21 104.0 79 67.1
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 3.2e-20 102.1 81 70.4
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 7.2e-20 100.9 73 71.2
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 7.2e-20 100.9 165 44.8
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 1.4e-18 96.7 80 65.0
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 2.3e-18 95.9 102 52.9
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 6.7e-18 94.4 81 63.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 8.8e-18 94.0 71 67.6
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 8.8e-18 94.0 64 76.6
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 8.8e-18 94.0 64 76.6
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.5e-17 93.2 88 52.3
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 4.3e-17 91.7 61 72.1
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.3e-16 90.1 61 77.0
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 8.2e-16 87.4 100 49.0
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 1.1e-15 87.0 88 50.0
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.4e-15 86.7 101 48.5
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.6e-14 82.4 63 68.3
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 2.1e-11 72.8 59 55.9
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 3.6e-11 72.0 53 73.6
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.0e-10 68.9 59 66.1
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 3.3e-09 65.5 66 47.0
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 7.4e-09 64.3 66 50.0


User provided reference genes

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