Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.3e-93 345.5 168 100.0
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.0e-40 170.6 192 54.7
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.2e-38 163.7 192 52.1
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 1.4e-34 150.2 171 53.2
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.5e-33 145.6 170 51.2
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 2.2e-32 142.9 182 50.0
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.9e-31 139.8 172 48.8
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 5.5e-31 138.3 178 50.0
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 7.5e-28 127.9 162 50.0
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 1.1e-26 124.0 177 47.5
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 3.1e-26 122.5 184 46.2
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 5.4e-26 121.7 175 48.0
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 3.5e-25 119.0 175 45.1
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 4.5e-25 118.6 177 45.8
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 1.5e-23 113.6 179 43.6
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 3.2e-23 112.5 180 42.2
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 5.5e-23 111.7 175 45.1
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 2.1e-22 109.8 174 40.2
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 1.0e-21 107.5 170 44.7
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 1.4e-21 107.1 172 43.6
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 6.8e-21 104.8 172 39.5
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 2.8e-19 99.4 148 44.6
MSTRG.6725 Avicennia marina HOM05D008142 ORTHO05D009674 1.8e-18 96.7 174 40.2
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.8e-18 96.7 180 40.6
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 9.2e-18 94.4 165 42.4
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 1.3e-16 90.5 163 40.5
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.3e-16 89.7 181 38.7
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.9e-16 89.4 173 39.9
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 3.8e-16 89.0 165 41.8
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.8e-16 89.0 165 41.8
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 3.8e-16 89.0 186 35.5
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.0e-16 88.6 195 36.4
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 6.6e-16 88.2 165 41.8
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 1.1e-15 87.4 175 38.3
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.5e-15 87.0 165 41.2
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.5e-15 87.0 195 36.9
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 1.5e-15 87.0 191 37.7
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.9e-15 86.7 167 40.7
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.9e-15 86.7 168 37.5
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.5e-15 86.3 177 38.4
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.5e-15 86.3 166 39.2
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 4.3e-15 85.5 191 37.7
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.3e-15 85.5 166 38.6
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 5.6e-15 85.1 143 42.7
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 9.5e-15 84.3 166 37.3
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 1.2e-14 84.0 188 37.2
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.6e-14 83.6 154 35.7
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.8e-14 82.8 173 37.0
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 2.8e-14 82.8 149 44.3
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 3.6e-14 82.4 198 39.4
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 6.1e-14 81.6 166 38.0
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 6.1e-14 81.6 165 38.2
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 8.0e-14 81.3 175 36.0
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.0e-13 80.9 166 36.7
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.0e-13 80.9 168 35.7
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.0e-13 80.9 166 38.0
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.0e-13 80.9 154 38.3
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.4e-13 80.5 166 38.0
Gohir.A01G042900 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.8e-13 80.1 168 35.1
MBI10_g02220_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 2.3e-13 79.7 136 42.6
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 3.0e-13 79.3 169 37.3
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 4.0e-13 79.0 183 36.6
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 5.2e-13 78.6 186 32.8
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 6.8e-13 78.2 183 39.9
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 8.9e-13 77.8 186 33.3
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 2.0e-12 76.6 174 35.1
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 7.5e-12 74.7 177 35.0
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 7.5e-12 74.7 171 37.4
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 1.7e-11 73.6 164 38.4
THA.LOC104822599 Tarenaya hassleriana HOM05D010899 ORTHO05D012947 2.2e-11 73.2 151 34.4
Gohir.A01G043200 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.9e-11 72.8 152 34.2
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.7e-11 72.4 186 33.3
Sabra16G0249800 Salix brachista HOM05D008142 ORTHO05D009674 1.1e-10 70.9 152 35.5
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 2.4e-10 69.7 172 33.7
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 2.0e-09 66.6 176 31.8
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 2.7e-09 66.2 187 32.1
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 4.6e-09 65.5 185 31.9
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 1.3e-08 63.9 159 35.2
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.7e-08 63.5 140 41.4
Oeu020030.1 Olea europaea HOM05D008142 ORTHO05D009674 1.7e-08 63.5 160 33.8
Sp3g12830 Schrenkiella parvula HOM05D010899 ORTHO05D012947 1.7e-08 63.5 148 35.8
DCAR_013786 Daucus carota HOM05D019704 ORTHO05D009674 3.0e-08 62.8 176 32.4
AL3G26890 Arabidopsis lyrata HOM05D010899 ORTHO05D012947 6.6e-08 61.6 147 35.4
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 1.5e-07 60.5 176 33.0
TAR627G0610 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.5e-07 60.5 72 48.6
CARHR089520 Cardamine hirsuta HOM05D010899 ORTHO05D012947 2.5e-07 59.7 151 32.5
AT3G14560 Arabidopsis thaliana HOM05D010899 ORTHO05D012947 4.3e-07 58.9 150 34.0
BcaB06g25375 Brassica carinata HOM05D010899 ORTHO05D012947 4.3e-07 58.9 147 33.3
A05p34870 Brassica napus HOM05D010899 ORTHO05D012947 4.3e-07 58.9 147 34.0
BraA05t22299Z Brassica rapa HOM05D010899 ORTHO05D012947 4.3e-07 58.9 147 34.0
BolC1t04944H Brassica oleracea HOM05D010899 ORTHO05D012947 9.5e-07 57.8 143 36.4
ATR0044G034 Amborella trichopoda HOM05D008142 ORTHO05D009674 1.2e-06 57.4 151 35.1
Thecc.07G144300 Theobroma cacao HOM05D023069 ORTHO05D009674 1.2e-06 57.4 131 40.5
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 2.1e-06 56.6 174 29.9
COL.COLO4_17431 Corchorus olitorius HOM05D023069 ORTHO05D009674 3.6e-06 55.8 134 35.1
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 3.6e-06 55.8 116 41.4
FvH4_3g16930 Fragaria vesca HOM05D015893 ORTHO05D019166 4.7e-06 55.5 182 28.6
FAN11G0710 Fragaria x ananassa HOM05D015893 ORTHO05D019166 4.7e-06 55.5 182 28.6
FAN16G3477 Fragaria x ananassa HOM05D015893 ORTHO05D019166 4.7e-06 55.5 182 28.6
Actinidia11208 Actinidia chinensis HOM05D050066 ORTHO05D012532 6.2e-06 55.1 144 30.6
Carub.0003s1425 Capsella rubella HOM05D010899 ORTHO05D012947 6.2e-06 55.1 147 34.0
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 6.2e-06 55.1 127 41.7
FAN21G1907 Fragaria x ananassa HOM05D015893 ORTHO05D019166 8.0e-06 54.7 181 30.4


User provided reference genes

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