Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032767 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 3.4e-138 495.0 248 100.0
CSS0035980 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 8.2e-124 447.2 227 99.1
CSS0010569 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.2e-119 433.3 227 96.9
CSS0006384 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.7e-116 422.9 221 95.5
CSS0049698 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.6e-106 389.8 227 88.5
Rhsim04G0203900 Rhododendron simsii HOM05D007243 ORTHO05D008795 1.5e-101 373.2 225 82.7
Dinv44497 Davidia involucrata HOM05D007243 ORTHO05D008795 1.2e-98 363.6 229 80.3
Actinidia40159 Actinidia chinensis HOM05D007243 ORTHO05D008795 1.6e-98 363.2 228 79.4
QL06p003720 Quercus lobata HOM05D007243 ORTHO05D008795 4.5e-98 361.7 229 76.9
GSVIVG01017910001 Vitis vinifera HOM05D007243 ORTHO05D008795 5.5e-96 354.8 229 78.2
Potri.010G092200 Populus trichocarpa HOM05D007243 ORTHO05D008795 1.6e-95 353.2 229 77.7
Cfa015954 Carpinus fangiana HOM05D007243 ORTHO05D008795 4.7e-95 351.7 228 76.3
FAN22G0759 Fragaria x ananassa HOM05D007243 ORTHO05D008795 8.0e-95 350.9 234 74.8
Haze_00531 Corylus avellana HOM05D007243 ORTHO05D008795 1.8e-94 349.7 228 75.4
FAN17G2203 Fragaria x ananassa HOM05D007243 ORTHO05D008795 2.3e-94 349.4 236 73.7
FAN12G3450 Fragaria x ananassa HOM05D007243 ORTHO05D008795 5.2e-94 348.2 229 75.5
FAN07G2291 Fragaria x ananassa HOM05D007243 ORTHO05D008795 8.9e-94 347.4 234 74.4
Manes.03G182200 Manihot esculenta HOM05D007243 ORTHO05D008795 8.9e-94 347.4 227 77.1
RcHm_v2.0_Chr4g0417341 Rosa chinensis HOM05D007243 ORTHO05D008795 8.9e-94 347.4 229 76.0
CANSAT78G2216 Cannabis sativa HOM05D007243 ORTHO05D008795 1.2e-93 347.1 229 76.4
FvH4_4g14870 Fragaria vesca HOM05D007243 ORTHO05D008795 1.2e-93 347.1 229 75.1
Sabra10G0051200 Salix brachista HOM05D007243 ORTHO05D008795 2.0e-93 346.3 229 76.4
TWI53G0761 Tripterygium wilfordii HOM05D007243 ORTHO05D008795 2.0e-93 346.3 229 74.2
CiPaw.01G162000 Carya illinoinensis HOM05D007243 ORTHO05D008795 5.7e-93 344.7 229 74.2
Ciclev10004897m.g Citrus clementina HOM05D007243 ORTHO05D008795 1.7e-92 343.2 228 74.1
Migut.G00308 Erythranthe guttata HOM05D007243 ORTHO05D008795 3.7e-92 342.0 227 74.9
Atru.chr4.2530 Acer truncatum HOM05D007243 ORTHO05D008795 6.3e-92 341.3 227 75.3
Solyc01g079800.4 Solanum lycopersicum HOM05D007243 ORTHO05D008795 8.3e-92 340.9 229 75.1
Sopen01g031560 Solanum pennellii HOM05D007243 ORTHO05D008795 1.8e-91 339.7 229 74.2
PGR004G2730 Punica granatum HOM05D007243 ORTHO05D008795 5.4e-91 338.2 228 73.2
COL.COLO4_05826 Corchorus olitorius HOM05D007243 ORTHO05D008795 9.2e-91 337.4 229 74.7
Prupe.1G153600 Prunus persica HOM05D007243 ORTHO05D008795 9.2e-91 337.4 229 75.1
PGSC0003DMG400008995 Solanum tuberosum HOM05D007243 ORTHO05D008795 9.2e-91 337.4 229 74.2
Nn1g02202 Nelumbo nucifera HOM05D007243 ORTHO05D008795 2.7e-90 335.9 229 73.8
Peaxi162Scf01336g00019 Petunia axillaris HOM05D007243 ORTHO05D008795 5.9e-90 334.7 228 74.1
CAN.G69.17 Capsicum annuum HOM05D007243 ORTHO05D008795 1.3e-89 333.6 229 73.8
Cpa.g.sc147.23 Carica papaya HOM05D007243 ORTHO05D008795 1.7e-89 333.2 228 74.1
MSTRG.4007 Avicennia marina HOM05D007243 ORTHO05D008795 2.9e-89 332.4 229 73.4
TAR636G1546 Trochodendron aralioides HOM05D007243 ORTHO05D008795 6.6e-89 331.3 229 74.2
MD16G1186800 Malus domestica HOM05D007243 ORTHO05D008795 8.6e-89 330.9 229 73.8
Cc03_g03320 Coffea canephora HOM05D007243 ORTHO05D008795 1.1e-88 330.5 228 71.5
ClCG05G005310 Citrullus lanatus HOM05D007243 ORTHO05D008795 1.9e-88 329.7 229 69.9
HanXRQChr17g0534161 Helianthus annuus HOM05D007243 ORTHO05D008795 5.6e-88 328.2 229 71.6
SGA_v2.0_scaffold237G43809 Striga asiatica HOM05D007243 ORTHO05D008795 5.6e-88 328.2 230 73.0
MELO3C006551.2 Cucumis melo HOM05D007243 ORTHO05D008795 7.3e-88 327.8 229 70.7
CsaV3_3G013560 Cucumis sativus L. HOM05D007243 ORTHO05D008795 9.5e-88 327.4 229 71.2
arahy.Tifrunner.gnm1.ann1.LD7MZL Arachis hypogaea HOM05D007243 ORTHO05D008795 1.2e-87 327.0 228 70.6
Sc25g0004470 Simmondsia chinensis HOM05D007243 ORTHO05D008795 1.6e-87 326.6 229 70.3
Duzib151G0916 Durio zibethinus HOM05D007243 ORTHO05D008795 1.0e-86 323.9 229 72.1
DCAR_027172 Daucus carota HOM05D007243 ORTHO05D008795 1.8e-86 323.2 229 73.4
arahy.Tifrunner.gnm1.ann1.V369CS Arachis hypogaea HOM05D007243 ORTHO05D008795 3.1e-86 322.4 228 68.9
BcaB05g23378 Brassica carinata HOM05D007243 ORTHO05D008795 5.2e-86 321.6 227 70.0
ECA240G0209 Erigeron canadensis HOM05D007243 ORTHO05D008795 6.8e-86 321.2 229 69.9
Aqoxy5G00515 Aquilegia oxysepala HOM05D007243 ORTHO05D008795 8.9e-86 320.9 228 71.9
Gohir.A10G118100 Gossypium hirsutum HOM05D007243 ORTHO05D008795 1.5e-85 320.1 234 69.2
Aa31LG11G10430 Aethionema arabicum HOM05D007243 ORTHO05D008795 3.4e-85 318.9 227 68.7
THA.LOC104822302 Tarenaya hassleriana HOM05D007243 ORTHO05D008795 4.4e-85 318.5 227 68.3
Thhalv10013438m.g Eutrema salsugineum HOM05D007243 ORTHO05D008795 9.8e-85 317.4 227 68.7
Gorai.011G165900 Gossypium raimondii HOM05D007243 ORTHO05D008795 9.8e-85 317.4 230 70.0
AUR62034676 Chenopodium quinoa HOM05D007243 ORTHO05D008795 1.3e-84 317.0 229 69.0
A02p05320 Brassica napus HOM05D007243 ORTHO05D008795 3.7e-84 315.5 227 68.3
BcaC03g13651 Brassica carinata HOM05D007243 ORTHO05D008795 4.9e-84 315.1 227 68.3
BNapus_Darmor_BZH_scaffold_38p02710 Brassica napus HOM05D007243 ORTHO05D008795 4.9e-84 315.1 227 68.3
Lsat_1_v5_gn_7_64360 Lactuca sativa HOM05D007243 ORTHO05D008795 4.9e-84 315.1 229 68.6
Gohir.D10G148600 Gossypium hirsutum HOM05D007243 ORTHO05D008795 6.4e-84 314.7 230 69.6
BraA02t05490Z Brassica rapa HOM05D007243 ORTHO05D008795 1.1e-83 313.9 227 67.8
BolC2t06945H Brassica oleracea HOM05D007243 ORTHO05D008795 2.4e-83 312.8 227 67.8
Medtr4g131750 Medicago truncatula HOM05D007243 ORTHO05D008795 7.0e-83 311.2 228 67.1
CARHR193750 Cardamine hirsuta HOM05D007243 ORTHO05D008795 9.2e-83 310.8 227 69.2
Sp6g25180 Schrenkiella parvula HOM05D003236 ORTHO05D008795 9.2e-83 310.8 227 67.4
TPR.G37009 Trifolium pratense HOM05D007243 ORTHO05D008795 2.0e-82 309.7 228 67.1
Ca_21100_v3 Cicer arietinum L. HOM05D007243 ORTHO05D008795 3.5e-82 308.9 228 65.8
AT5G19210 Arabidopsis thaliana HOM05D007243 ORTHO05D008795 4.6e-82 308.5 227 68.3
Lj4g0016275 Lotus japonicus HOM05D007243 ORTHO05D008795 4.6e-82 308.5 228 66.2
PSO210G6087 Papaver somniferum HOM05D007243 ORTHO05D008795 1.0e-81 307.4 230 68.3
AL6G30660 Arabidopsis lyrata HOM05D007243 ORTHO05D008795 1.3e-81 307.0 227 68.3
Glyma.07G258400 Glycine max HOM05D007243 ORTHO05D008795 3.0e-81 305.8 228 66.7
Lalb_Chr12g0196161 Lupinus albus HOM05D007243 ORTHO05D008795 3.0e-81 305.8 228 65.4
Carub.0006s1755 Capsella rubella HOM05D007243 ORTHO05D008795 8.6e-81 304.3 227 67.8
Os01g0970600 Oryza sativa ssp. japonica HOM05D007243 ORTHO05D008795 1.1e-80 303.9 227 66.5
PSO832G0154 Papaver somniferum HOM05D007243 ORTHO05D008795 1.1e-80 303.9 231 66.7
Phvul.003G076400 Phaseolus vulgaris HOM05D007243 ORTHO05D008795 1.9e-80 303.1 228 65.8
Zm00001eb362300 Zea mays HOM05D007243 ORTHO05D008795 4.7e-79 298.5 242 62.8
VMungo1215G2267 Vigna mungo HOM05D007243 ORTHO05D008795 1.7e-76 290.0 249 61.4
Psat4g008120 Pisum sativum HOM05D007243 ORTHO05D008795 2.2e-76 289.7 228 63.6
CSS0009496 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 1.1e-75 287.3 235 68.9
ATR0006G025 Amborella trichopoda HOM05D007243 ORTHO05D008795 2.4e-75 286.2 229 65.1
Thecc.04G225400 Theobroma cacao HOM05D007243 ORTHO05D008795 7.0e-75 284.6 229 65.9
unitig_736.g22490 Utricularia gibba HOM05D007243 ORTHO05D008795 2.1e-74 283.1 228 63.6
CSS0005076 Camellia sinensis var. sinensis HOM05D007243 ORTHO05D008795 2.8e-71 272.7 204 74.0
Nitab4.5_0000968g0030 Nicotiana tabacum HOM05D007243 ORTHO05D008795 1.1e-70 270.8 229 62.9
Sed0009204 Sechium edule HOM05D007243 ORTHO05D008795 1.1e-70 270.8 182 70.9
SEGI_00208 Sequoiadendron giganteum HOM05D007243 ORTHO05D008795 4.3e-64 248.8 238 56.7
HPP92_010110 Vanilla planifolia HOM05D007243 ORTHO05D008795 1.2e-63 247.3 229 56.3
Eucgr.H03569 Eucalyptus grandis HOM05D007243 ORTHO05D008795 2.0e-61 240.0 211 59.2
Pp3c6_17260 Physcomitrium patens HOM05D000032 ORTHO05D008795 2.4e-54 216.5 240 48.8
EL10As3g23348 Beta vulgaris HOM05D007243 ORTHO05D008795 1.4e-51 207.2 229 49.8
Eucgr.H03567 Eucalyptus grandis HOM05D007243 ORTHO05D008795 2.7e-50 203.0 230 47.8
Hund12173 Selenicereus undatus HOM05D007243 ORTHO05D008795 3.0e-49 199.5 229 48.9
CDE01G0429 Ceratophyllum demersum HOM05D007243 ORTHO05D008795 1.4e-46 190.7 166 60.8
AagrBONN_evm.TU.Sc2ySwM_228.3218 Anthoceros agrestis HOM05D007243 ORTHO05D008795 2.4e-46 189.9 241 42.7
Nitab4.5_0000630g0110 Nicotiana tabacum HOM05D007243 ORTHO05D008795 4.9e-44 182.2 229 48.5
SMO146G0285 Selaginella moellendorffii HOM05D000032 ORTHO05D008795 1.2e-42 177.6 211 42.2
Mapoly0066s0058 Marchantia polymorpha HOM05D000032 ORTHO05D008795 1.3e-41 174.1 215 40.9
Eucgr.H03571 Eucalyptus grandis HOM05D007243 ORTHO05D008795 4.9e-36 155.6 107 67.3
CBR_g57658 Chara braunii HOM05D000019 ORTHO05D008795 1.0e-33 147.9 221 38.0
Lj3C742G23 Lonicera japonica HOM05D007243 ORTHO05D008795 2.1e-31 140.2 229 42.8
AUR62038087 Chenopodium quinoa HOM05D007243 ORTHO05D008795 4.8e-23 112.5 79 68.4
CDE01G0152 Ceratophyllum demersum HOM05D002717 ORTHO05D002937 4.5e-21 105.9 82 65.9
MBI19_g39604_MAGBIO Magnolia biondii HOM05D007243 ORTHO05D008795 4.8e-15 85.9 140 40.0
MD13G1186000 Malus domestica HOM05D007243 ORTHO05D008795 1.7e-12 77.4 96 47.9
Glyma.17G015700 Glycine max HOM05D007243 ORTHO05D008795 6.1e-10 68.9 55 65.5
DCAR_031342 Daucus carota HOM05D000495 ORTHO05D000357 5.3e-06 55.8 39 66.7


User provided reference genes

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