Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032761 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.3e-65 251.1 123 100.0
CSS0002123 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.2e-59 233.0 123 95.1
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.4e-54 214.5 123 89.4
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.2e-36 155.2 94 86.2
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.4e-33 144.1 94 80.9
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.9e-29 131.3 99 72.7
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.1e-28 130.2 94 75.5
CSS0004888 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.2e-28 128.6 94 72.3
CSS0041884 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.2e-28 128.3 93 75.3
CSS0039150 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.1e-23 111.7 94 66.0
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 2.8e-16 89.0 98 52.0
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 1.8e-15 86.3 94 51.1
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 8.5e-13 77.4 119 46.2
CSS0029313 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.2e-11 73.6 82 53.7
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 2.1e-11 72.8 94 46.8
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 2.7e-11 72.4 83 49.4
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 6.7e-10 67.8 113 44.2
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 2.8e-08 62.4 75 52.0
RcHm_v2.0_Chr5g0021121 Rosa chinensis HOM05D003515 ORTHO05D004347 4.8e-08 61.6 94 39.4
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 6.3e-08 61.2 101 38.6
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 6.3e-08 61.2 101 38.6
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 6.3e-08 61.2 86 43.0
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 2.4e-07 59.3 90 40.0
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 4.1e-07 58.5 83 42.2
RcHm_v2.0_Chr4g0406921 Rosa chinensis HOM05D003515 ORTHO05D004347 9.1e-07 57.4 84 40.5


User provided reference genes

Program Settings