Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032748 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 1.3e-123 446.4 233 100.0
CSS0020935 Camellia sinensis var. sinensis HOM05D000905 ORTHO05D000749 1.1e-117 426.8 225 99.1
Actinidia38531 Actinidia chinensis HOM05D000905 ORTHO05D000749 1.4e-77 293.5 212 73.1
Dinv12618 Davidia involucrata HOM05D000905 ORTHO05D000749 1.3e-75 287.0 212 71.2
QL11p008075 Quercus lobata HOM05D000905 ORTHO05D000749 9.9e-71 270.8 212 67.9
GSVIVG01032268001 Vitis vinifera HOM05D000905 ORTHO05D000749 4.2e-69 265.4 210 69.0
Rhsim03G0270200 Rhododendron simsii HOM05D000905 ORTHO05D000749 1.0e-67 260.8 212 68.9
Rhsim03G0270400 Rhododendron simsii HOM05D000905 ORTHO05D000749 2.3e-67 259.6 217 68.2
vmacro22705 Vaccinium macrocarpon HOM05D000905 ORTHO05D000749 3.0e-67 259.2 210 69.0
Rhsim05G0215300 Rhododendron simsii HOM05D000905 ORTHO05D000749 6.6e-67 258.1 217 67.3
Haze_19092 Corylus avellana HOM05D000905 ORTHO05D000749 3.6e-65 252.3 212 66.5
TAR626G0450 Trochodendron aralioides HOM05D000905 ORTHO05D000749 3.4e-63 245.7 211 61.6
Hma1.2p1_1704F.1_g298330 Hydrangea macrophylla HOM05D000905 ORTHO05D000749 9.9e-63 244.2 207 62.3
Prupe.1G063300 Prunus persica HOM05D000905 ORTHO05D000749 1.3e-62 243.8 211 62.1
Ciclev10007456m.g Citrus clementina HOM05D000905 ORTHO05D000749 4.9e-62 241.9 209 63.2
CiPaw.15G161600 Carya illinoinensis HOM05D000905 ORTHO05D000749 2.7e-60 236.1 212 63.7
Dinv26483 Davidia involucrata HOM05D000905 ORTHO05D000749 2.7e-60 236.1 206 63.1
Atru.chr7.1006 Acer truncatum HOM05D000905 ORTHO05D000749 1.8e-59 233.4 209 59.8
Thecc.09G200900 Theobroma cacao HOM05D000905 ORTHO05D000749 2.3e-59 233.0 210 59.5
MD13G1232000 Malus domestica HOM05D000905 ORTHO05D000749 9.6e-58 227.6 210 60.0
Nn8g41147 Nelumbo nucifera HOM05D000905 ORTHO05D000749 1.6e-57 226.9 209 57.9
Potri.006G079500 Populus trichocarpa HOM05D000905 ORTHO05D000749 2.4e-56 223.0 209 57.9
COL.COLO4_06603 Corchorus olitorius HOM05D000905 ORTHO05D000749 6.9e-56 221.5 210 56.7
FAN17G0320 Fragaria x ananassa HOM05D000905 ORTHO05D000749 1.2e-55 220.7 212 59.0
Duzib150G0956 Durio zibethinus HOM05D000905 ORTHO05D000749 1.5e-55 220.3 208 56.7
Lj5A802T82 Lonicera japonica HOM05D000905 ORTHO05D000749 3.4e-55 219.2 209 61.2
Sabra06G0060100 Salix brachista HOM05D000905 ORTHO05D000749 3.4e-55 219.2 209 57.9
FAN07G0268 Fragaria x ananassa HOM05D000905 ORTHO05D000749 7.6e-55 218.0 212 59.0
FvH4_4g05970 Fragaria vesca HOM05D000905 ORTHO05D000749 1.3e-54 217.2 212 58.5
FAN12G0461 Fragaria x ananassa HOM05D000905 ORTHO05D000749 1.3e-54 217.2 212 58.5
MBI13_g33567_MAGBIO Magnolia biondii HOM05D000905 ORTHO05D000749 3.2e-53 212.6 218 54.6
RcHm_v2.0_Chr4g0397171 Rosa chinensis HOM05D000905 ORTHO05D000749 4.2e-53 212.2 212 56.6
Manes.02G223100 Manihot esculenta HOM05D000905 ORTHO05D000749 1.6e-52 210.3 209 55.0
PGSC0003DMG400013571 Solanum tuberosum HOM05D000905 ORTHO05D000749 7.9e-52 208.0 212 53.8
Solyc07g042580.3 Solanum lycopersicum HOM05D000905 ORTHO05D000749 1.8e-51 206.8 212 53.3
Sopen07g022270 Solanum pennellii HOM05D000905 ORTHO05D000749 3.9e-51 205.7 212 53.3
Gohir.D08G026000 Gossypium hirsutum HOM05D000905 ORTHO05D000749 6.7e-51 204.9 210 52.4
MSTRG.5962 Avicennia marina HOM05D000905 ORTHO05D000749 8.7e-51 204.5 219 52.5
Cc06_g23880 Coffea canephora HOM05D000905 ORTHO05D000749 1.5e-50 203.8 212 54.7
Gorai.004G022300 Gossypium raimondii HOM05D000905 ORTHO05D000749 1.9e-50 203.4 210 52.9
MSTRG.19400 Avicennia marina HOM05D000905 ORTHO05D000749 7.4e-50 201.4 212 51.4
Gohir.A08G015700 Gossypium hirsutum HOM05D000905 ORTHO05D000749 2.1e-49 199.9 203 53.7
Nitab4.5_0000170g0070 Nicotiana tabacum HOM05D000905 ORTHO05D000749 3.7e-49 199.1 212 51.4
MD16G1236800 Malus domestica HOM05D000905 ORTHO05D000749 6.2e-49 198.4 216 53.2
Peaxi162Scf00474g00525 Petunia axillaris HOM05D000905 ORTHO05D000749 6.2e-49 198.4 209 51.7
MELO3C009998.2 Cucumis melo HOM05D000905 ORTHO05D000749 1.1e-48 197.6 209 51.7
CsaV3_1G044050 Cucumis sativus L. HOM05D000905 ORTHO05D000749 2.4e-48 196.4 209 51.7
HanXRQChr12g0358601 Helianthus annuus HOM05D000905 ORTHO05D000749 2.4e-48 196.4 190 56.3
ClCG03G011840 Citrullus lanatus HOM05D000905 ORTHO05D000749 4.0e-48 195.7 209 52.2
Sed0005399 Sechium edule HOM05D000905 ORTHO05D000749 6.9e-48 194.9 210 51.9
ECA234G3957 Erigeron canadensis HOM05D000905 ORTHO05D000749 9.0e-48 194.5 194 56.7
Nitab4.5_0003139g0090 Nicotiana tabacum HOM05D000905 ORTHO05D000749 2.0e-47 193.4 212 50.9
Oeu000962.1 Olea europaea HOM05D000905 ORTHO05D000749 2.2e-46 189.9 209 52.2
TWI34G1969 Tripterygium wilfordii HOM05D000905 ORTHO05D000749 4.9e-46 188.7 207 52.7
Phvul.004G178400 Phaseolus vulgaris HOM05D000905 ORTHO05D000749 8.4e-46 188.0 212 50.9
Migut.J00844 Erythranthe guttata HOM05D000905 ORTHO05D000749 1.1e-45 187.6 212 49.1
VMungo0464G0816 Vigna mungo HOM05D000905 ORTHO05D000749 1.9e-45 186.8 208 51.4
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 7.1e-45 184.9 209 52.2
Eucgr.C00061 Eucalyptus grandis HOM05D000905 ORTHO05D000749 1.3e-43 180.6 211 48.3
Lj2g0025756 Lotus japonicus HOM05D000905 ORTHO05D000749 8.7e-43 177.9 208 50.0
CANSAT80G1045 Cannabis sativa HOM05D000905 ORTHO05D000749 7.4e-42 174.9 229 51.5
Lalb_Chr14g0363561 Lupinus albus HOM05D000905 ORTHO05D000749 1.6e-41 173.7 212 45.8
Lsat_1_v5_gn_5_80920 Lactuca sativa HOM05D000905 ORTHO05D000749 3.7e-41 172.6 190 54.7
arahy.Tifrunner.gnm1.ann1.8F9W5H Arachis hypogaea HOM05D000905 ORTHO05D000749 4.8e-41 172.2 213 47.4
DCAR_014584 Daucus carota HOM05D000905 ORTHO05D000749 3.1e-40 169.5 212 47.6
SalBow6G6089 Salvia bowleyana HOM05D000905 ORTHO05D000749 9.0e-40 167.9 205 48.3
arahy.Tifrunner.gnm1.ann1.TW4R6Z Arachis hypogaea HOM05D000905 ORTHO05D000749 1.2e-39 167.5 213 46.5
PSO063G0310 Papaver somniferum HOM05D000905 ORTHO05D000749 1.2e-39 167.5 207 45.4
arahy.Tifrunner.gnm1.ann1.R9TITG Arachis hypogaea HOM05D000905 ORTHO05D000749 2.6e-39 166.4 213 46.9
arahy.Tifrunner.gnm1.ann1.SP0CEZ Arachis hypogaea HOM05D000905 ORTHO05D000749 3.4e-39 166.0 213 47.4
PSO170G0491 Papaver somniferum HOM05D000905 ORTHO05D000749 3.4e-39 166.0 206 45.6
Sp7g16580 Schrenkiella parvula HOM05D000905 ORTHO05D000749 1.0e-38 164.5 212 44.8
PGR044G0190 Punica granatum HOM05D000905 ORTHO05D000749 2.2e-38 163.3 213 45.5
Aqoxy7G02654 Aquilegia oxysepala HOM05D000905 ORTHO05D000749 8.5e-38 161.4 210 47.6
THA.LOC104815308 Tarenaya hassleriana HOM05D000905 ORTHO05D000749 8.5e-38 161.4 210 44.3
Medtr6g093150 Medicago truncatula HOM05D000905 ORTHO05D000749 3.2e-37 159.5 216 46.3
Thhalv10024428m.g Eutrema salsugineum HOM05D000905 ORTHO05D000749 1.8e-35 153.7 212 42.0
BcaNung00077 Brassica carinata HOM05D000905 ORTHO05D000749 2.3e-35 153.3 214 42.1
AT2G07170 Arabidopsis thaliana HOM05D000905 ORTHO05D000749 1.9e-34 150.2 212 42.0
AL3G44100 Arabidopsis lyrata HOM05D000905 ORTHO05D000749 2.5e-34 149.8 212 41.0
Carub.0013s0002 Capsella rubella HOM05D000905 ORTHO05D000749 5.7e-34 148.7 212 42.5
TPR.G21353 Trifolium pratense HOM05D000905 ORTHO05D000749 5.7e-34 148.7 212 49.1
AUR62020728 Chenopodium quinoa HOM05D000905 ORTHO05D000749 4.8e-33 145.6 217 40.6
Glyma.01G001200 Glycine max HOM05D000905 ORTHO05D000749 1.8e-32 143.7 199 48.2
BraA01t00909Z Brassica rapa HOM05D000905 ORTHO05D000749 2.4e-32 143.3 206 40.8
AUR62027985 Chenopodium quinoa HOM05D000905 ORTHO05D000749 3.1e-32 142.9 216 40.3
EL10Ac2g03625 Beta vulgaris HOM05D000905 ORTHO05D000749 4.1e-32 142.5 220 39.5
Lsat_1_v5_gn_7_57441 Lactuca sativa HOM05D000905 ORTHO05D000749 4.1e-32 142.5 186 47.3
Atru.chr1.2068 Acer truncatum HOM05D000905 ORTHO05D000749 5.3e-32 142.1 129 62.0
Atru.chr5.2812 Acer truncatum HOM05D000905 ORTHO05D000749 5.3e-32 142.1 129 62.0
ATR0626G346 Amborella trichopoda HOM05D000905 ORTHO05D000749 3.4e-31 139.4 222 39.2
BcaC09g51628 Brassica carinata HOM05D000905 ORTHO05D000749 3.4e-31 139.4 212 40.6
Hund19356 Selenicereus undatus HOM05D000905 ORTHO05D000749 4.5e-31 139.0 217 42.4
A01p09660 Brassica napus HOM05D000905 ORTHO05D000749 1.3e-30 137.5 212 40.1
CARHR104000 Cardamine hirsuta HOM05D000905 ORTHO05D000749 1.7e-30 137.1 212 41.0
Sc23g0004380 Simmondsia chinensis HOM05D000905 ORTHO05D000749 2.2e-30 136.7 214 43.0
C01p11270 Brassica napus HOM05D000905 ORTHO05D000749 2.9e-30 136.3 212 39.6
BolC1t01092H Brassica oleracea HOM05D000905 ORTHO05D000749 5.5e-29 132.1 206 39.3
unitig_27.g24762 Utricularia gibba HOM05D000905 ORTHO05D000749 9.4e-29 131.3 213 44.1
Ah.10g032720 Amaranthus hybridus HOM05D000905 ORTHO05D000749 1.3e-25 120.9 220 35.5
Aa31sc130G70 Aethionema arabicum HOM05D000905 ORTHO05D000749 1.2e-23 114.4 206 37.9
Os09g0560000 Oryza sativa ssp. japonica HOM05D000905 ORTHO05D000749 1.0e-22 111.3 216 34.3
Zm00001eb320350 Zea mays HOM05D000905 ORTHO05D000749 1.0e-19 101.3 188 34.6
HPP92_004720 Vanilla planifolia HOM05D000905 ORTHO05D000749 2.4e-16 90.1 187 35.3
Actinidia29981 Actinidia chinensis HOM05D000905 ORTHO05D000749 3.1e-16 89.7 78 61.5
Psat1g051600 Pisum sativum HOM05D000905 ORTHO05D000749 1.0e-14 84.7 206 32.0
CDE04G0438 Ceratophyllum demersum HOM05D000905 ORTHO05D000749 9.4e-13 78.2 194 35.1
CDE07G0595 Ceratophyllum demersum HOM05D000905 ORTHO05D000749 2.6e-10 70.1 171 34.5
SEGI_18148 Sequoiadendron giganteum HOM05D000905 ORTHO05D000749 2.4e-08 63.5 235 27.2
SEGI_30691 Sequoiadendron giganteum HOM05D000905 ORTHO05D000749 9.1e-08 61.6 194 30.4
HPP92_004721 Vanilla planifolia HOM05D000905 ORTHO05D000749 7.7e-07 58.5 106 42.5


User provided reference genes

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