Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.3e-52 209.5 113 100.0
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 6.5e-44 180.6 111 89.2
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 6.8e-41 170.6 111 82.0
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 5.7e-40 167.5 111 82.9
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 6.3e-39 164.1 104 83.7
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.1e-38 163.3 111 82.0
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 2.5e-35 152.1 110 77.3
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.0e-33 146.7 111 71.2
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.4e-33 146.4 111 69.4
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.4e-33 146.4 111 70.3
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 1.8e-33 146.0 109 76.1
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.5e-32 142.9 113 72.6
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 2.0e-32 142.5 112 73.2
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.6e-32 142.1 102 75.5
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 3.4e-32 141.7 105 73.3
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 5.7e-32 141.0 113 69.0
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 7.5e-32 140.6 109 73.4
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 9.8e-32 140.2 111 71.2
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 9.8e-32 140.2 114 67.5
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.3e-31 139.8 106 70.8
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.8e-31 138.7 113 66.4
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.1e-30 136.7 100 75.0
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 1.8e-30 136.0 105 68.6
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 2.4e-30 135.6 100 75.0
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 2.4e-30 135.6 115 63.5
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.4e-30 135.6 115 63.5
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 3.1e-30 135.2 114 67.5
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 4.1e-30 134.8 105 67.6
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 5.4e-30 134.4 111 66.7
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 5.4e-30 134.4 113 64.6
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 7.0e-30 134.0 111 62.2
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 7.0e-30 134.0 112 68.8
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 7.0e-30 134.0 108 73.1
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 7.0e-30 134.0 110 68.2
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 9.2e-30 133.7 109 68.8
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.6e-29 132.9 103 73.8
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.7e-29 132.1 112 67.9
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.7e-29 132.1 112 65.2
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 3.5e-29 131.7 105 69.5
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 4.5e-29 131.3 112 67.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 4.5e-29 131.3 101 71.3
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.0e-28 130.2 103 73.8
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.0e-28 130.2 104 70.2
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 1.7e-28 129.4 113 67.3
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.9e-28 128.6 109 66.1
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 3.8e-28 128.3 103 69.9
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 5.0e-28 127.9 109 67.0
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 6.6e-28 127.5 109 65.1
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 8.6e-28 127.1 103 71.8
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 8.6e-28 127.1 110 65.5
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 8.6e-28 127.1 105 63.8
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.1e-27 126.7 109 67.9
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 1.1e-27 126.7 110 65.5
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.5e-27 126.3 107 69.2
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 1.5e-27 126.3 109 67.9
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.5e-27 126.3 94 76.6
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.9e-27 125.9 104 72.1
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 3.3e-27 125.2 109 63.3
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 5.6e-27 124.4 113 62.8
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 5.6e-27 124.4 113 62.8
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 5.6e-27 124.4 108 64.8
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.6e-26 122.9 83 84.3
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 2.1e-26 122.5 105 65.7
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 4.7e-26 121.3 105 64.8
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 8.0e-26 120.6 103 67.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.4e-25 119.8 102 63.7
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 2.3e-25 119.0 103 64.1
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 5.2e-25 117.9 114 64.0
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.0e-24 115.9 103 62.1
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 4.4e-24 114.8 103 61.2
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 2.2e-23 112.5 103 59.2
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 2.9e-23 112.1 101 60.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 2.9e-23 112.1 101 60.4
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.7e-23 111.7 105 58.1
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 3.7e-23 111.7 103 61.2
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.7e-23 111.7 93 64.5
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.7e-23 111.7 104 64.4
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 6.4e-23 110.9 101 59.4
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 6.4e-23 110.9 109 59.6
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 8.3e-23 110.5 101 59.4
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 8.3e-23 110.5 97 63.9
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.8e-22 109.4 103 60.2
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.8e-22 109.4 82 74.4
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 7.0e-22 107.5 83 74.7
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.2e-21 106.7 162 44.4
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.6e-21 106.3 103 56.3
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 2.0e-21 105.9 112 57.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 7.8e-21 104.0 119 52.1
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 7.8e-21 104.0 83 73.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 7.8e-21 104.0 79 70.9
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.3e-20 103.2 101 59.4
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.3e-20 102.4 111 54.1
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 1.6e-18 96.3 105 54.3
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.6e-18 95.1 129 48.1
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.4e-17 93.2 60 83.3
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 6.8e-17 90.9 101 49.5
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 5.8e-16 87.8 69 71.0
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.3e-15 86.7 101 54.5
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 3.2e-14 82.0 82 57.3
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 5.6e-11 71.2 91 45.1
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 9.5e-11 70.5 127 40.2
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.6e-10 69.7 110 40.9
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.9e-07 58.9 93 40.9


User provided reference genes

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