Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.7e-205 719.2 371 100.0
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 6.5e-149 531.2 354 80.8
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.1e-74 284.6 536 39.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 7.3e-60 235.3 600 35.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.3e-53 214.5 603 32.3
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.8e-51 206.8 525 32.2
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.6e-51 206.5 626 31.6
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.1e-47 194.9 412 35.9
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.5e-44 183.7 490 31.6
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.8e-43 180.3 479 32.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.7e-43 179.9 501 30.9
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.8e-43 179.5 505 31.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.1e-42 178.3 473 32.6
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.1e-42 176.8 460 33.0
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.3e-42 176.0 473 32.3
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-41 174.9 474 32.3
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.5e-41 174.5 502 30.5
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 4.5e-41 172.9 464 33.0
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 5.8e-41 172.6 476 31.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.7e-40 171.0 464 33.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.2e-40 170.6 421 36.3
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 4.2e-39 166.4 638 29.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-37 161.4 456 30.7
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 5.1e-37 159.5 406 31.8
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 5.7e-36 156.0 536 31.0
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 6.9e-34 149.1 524 29.2
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 2.0e-33 147.5 451 29.7
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 4.5e-33 146.4 503 30.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.7e-32 144.4 529 29.9
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 7.9e-30 135.6 431 31.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 3.0e-29 133.7 556 27.2
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 8.7e-29 132.1 485 29.3
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.3e-28 129.8 173 47.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-27 127.9 512 28.9
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.8e-27 127.1 511 29.2
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.8e-27 127.1 511 29.2
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 6.3e-27 125.9 541 27.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.8e-26 124.4 535 26.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 3.1e-26 123.6 472 27.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.0e-25 120.9 472 29.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.3e-24 118.2 485 26.6
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 3.8e-24 116.7 448 27.2
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 9.4e-23 112.1 491 27.7
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.6e-22 111.3 329 31.3
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.6e-22 111.3 539 26.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 6.7e-21 105.9 420 26.9
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 6.7e-21 105.9 524 24.4
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.1e-20 105.1 552 25.2
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.5e-20 104.8 510 25.3
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.5e-20 104.8 394 29.7
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.0e-20 104.4 562 25.1
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 7.4e-20 102.4 538 26.6
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 4.1e-18 96.7 173 38.7
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 4.5e-17 93.2 604 23.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 5.9e-17 92.8 179 37.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 7.7e-17 92.4 418 27.8
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 5.0e-16 89.7 425 25.9
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 8.5e-16 89.0 218 32.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.2e-15 87.0 366 29.0
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.2e-15 86.7 139 42.4
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 9.4e-15 85.5 139 41.7
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-14 84.7 139 41.7
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.6e-14 83.6 190 34.2
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.6e-14 83.6 74 50.0
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.3e-13 80.9 435 26.9
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 2.3e-13 80.9 102 44.1
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 3.9e-13 80.1 191 32.5
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 6.7e-13 79.3 55 61.8
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 6.7e-13 79.3 345 27.2
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.6e-12 77.4 190 30.5
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 7.4e-12 75.9 184 29.9
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 7.4e-12 75.9 352 23.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 7.4e-12 75.9 48 70.8
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.3e-11 75.1 339 28.9
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.3e-11 75.1 51 66.7
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.3e-11 75.1 492 23.6
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.7e-11 74.7 48 68.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.2e-11 74.3 438 26.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.8e-11 73.9 427 26.0
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.8e-11 73.9 74 47.3
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 4.8e-11 73.2 449 24.3
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 4.8e-11 73.2 104 39.4
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.8e-10 71.2 430 25.6
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 3.1e-10 70.5 338 26.9
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 4.1e-10 70.1 432 25.2
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 7.0e-10 69.3 436 26.1
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 3.5e-09 67.0 97 36.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 5.9e-09 66.2 53 56.6
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 7.7e-09 65.9 388 26.3
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.0e-08 65.5 54 46.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.0e-08 65.5 507 24.9
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.9e-08 63.9 171 28.1
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.1e-07 62.0 53 56.6
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 5.5e-07 59.7 40 65.0
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 5.5e-07 59.7 500 23.2
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 9.4e-07 58.9 343 22.2
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.4e-07 58.9 47 53.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.6e-06 58.2 491 21.6
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 3.6e-06 57.0 405 23.2
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.7e-06 56.6 55 45.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 4.7e-06 56.6 55 45.5


User provided reference genes

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