Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.0e-111 405.2 208 100.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.2e-106 389.0 202 98.5
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.2e-106 389.0 202 98.5
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.2e-106 389.0 202 98.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.8e-106 388.3 202 98.0
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.9e-105 386.0 202 98.0
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.2e-105 384.8 202 97.5
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.7e-99 364.0 202 94.1
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-98 362.8 202 93.6
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-88 329.3 195 89.2
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.2e-51 207.2 188 64.9
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 3.4e-38 162.5 150 60.7
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 1.7e-37 160.2 224 48.7
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 4.1e-36 155.6 131 63.4
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 3.5e-35 152.5 105 75.2
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 8.6e-34 147.9 111 68.5
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.1e-33 147.5 129 60.5
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.5e-33 146.4 148 58.1
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 3.3e-33 146.0 158 55.7
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.3e-33 145.6 129 60.5
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 4.3e-33 145.6 116 62.1
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 4.3e-33 145.6 135 59.3
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 9.5e-33 144.4 140 55.7
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 9.5e-33 144.4 107 66.4
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 1.2e-32 144.1 105 71.4
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 6.2e-32 141.7 117 62.4
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 2.4e-31 139.8 117 61.5
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 2.4e-31 139.8 113 62.8
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 5.2e-31 138.7 113 63.7
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 7.6e-30 134.8 162 51.9
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.3e-29 134.0 125 59.2
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.3e-29 134.0 125 59.2
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.7e-29 133.7 116 59.5
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.7e-29 133.7 165 50.3
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 4.9e-29 132.1 117 58.1
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 4.9e-29 132.1 125 58.4
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.4e-28 129.8 117 56.4
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.6e-27 127.1 114 57.0
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 1.7e-26 123.6 108 63.0
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 8.7e-26 121.3 115 55.7
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 1.1e-25 120.9 117 53.8
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 3.3e-25 119.4 104 59.6
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 5.6e-25 118.6 121 54.5
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 5.6e-25 118.6 104 58.7
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 5.6e-25 118.6 115 54.8
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 9.6e-25 117.9 117 54.7
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 9.6e-25 117.9 104 58.7
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 9.6e-25 117.9 104 58.7
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 9.6e-25 117.9 104 58.7
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.2e-24 117.5 117 55.6
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.6e-24 117.1 99 60.6
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 2.1e-24 116.7 117 54.7
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.8e-24 116.3 104 57.7
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 2.8e-24 116.3 103 59.2
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.8e-24 116.3 131 52.7
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 6.2e-24 115.2 92 62.0
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.8e-23 113.6 113 54.0
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 2.4e-23 113.2 104 56.7
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 3.1e-23 112.8 117 53.8
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 5.3e-23 112.1 106 56.6
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.0e-22 110.2 142 43.0
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.0e-22 110.2 142 43.0
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 5.8e-22 108.6 105 52.4
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 6.4e-21 105.1 80 66.2
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 3.2e-20 102.8 236 33.9
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 5.1e-18 95.5 82 59.8
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 9.6e-17 91.3 123 41.5
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.1e-16 90.1 54 77.8
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 2.8e-16 89.7 62 72.6
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 3.0e-10 69.7 67 61.2
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 1.6e-08 63.9 78 51.3
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 2.0e-06 57.0 100 41.0


User provided reference genes

Program Settings