Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 9.3e-29 129.4 61 100.0
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 5.9e-23 110.2 57 87.7
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 5.9e-23 110.2 57 87.7
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.0e-22 109.4 55 92.7
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 3.8e-22 107.5 57 84.2
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 6.5e-22 106.7 56 87.5
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.1e-21 105.9 57 87.7
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 1.4e-21 105.5 57 84.2
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 2.5e-21 104.8 57 86.0
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 2.5e-21 104.8 57 86.0
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 2.5e-21 104.8 57 84.2
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.5e-21 104.8 51 94.1
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 3.2e-21 104.4 57 82.5
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 3.2e-21 104.4 57 86.0
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 3.2e-21 104.4 57 86.0
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 5.5e-21 103.6 57 86.0
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 5.5e-21 103.6 57 84.2
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 7.2e-21 103.2 57 84.2
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 7.2e-21 103.2 57 82.5
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 7.2e-21 103.2 57 84.2
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 9.3e-21 102.8 57 84.2
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 9.3e-21 102.8 57 84.2
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 9.3e-21 102.8 57 84.2
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 1.2e-20 102.4 57 84.2
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 1.6e-20 102.1 57 84.2
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 2.1e-20 101.7 57 84.2
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 2.1e-20 101.7 57 84.2
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 2.1e-20 101.7 57 82.5
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 2.7e-20 101.3 54 87.0
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 2.7e-20 101.3 54 87.0
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 3.6e-20 100.9 56 83.9
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 3.6e-20 100.9 55 83.6
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 3.6e-20 100.9 57 82.5
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 4.6e-20 100.5 57 78.9
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 4.6e-20 100.5 57 82.5
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 6.1e-20 100.1 57 82.5
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 6.1e-20 100.1 57 82.5
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 6.1e-20 100.1 57 84.2
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 7.9e-20 99.8 57 80.7
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 1.0e-19 99.4 57 82.5
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.0e-19 99.4 57 80.7
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 1.0e-19 99.4 57 80.7
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 1.3e-19 99.0 57 80.7
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.8e-19 98.6 57 80.7
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 1.8e-19 98.6 57 80.7
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 1.8e-19 98.6 57 80.7
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 1.8e-19 98.6 57 78.9
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 2.3e-19 98.2 57 78.9
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 2.3e-19 98.2 57 78.9
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 3.0e-19 97.8 57 80.7
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 3.0e-19 97.8 57 78.9
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 3.0e-19 97.8 57 80.7
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 3.9e-19 97.4 57 78.9
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 3.9e-19 97.4 57 78.9
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 5.1e-19 97.1 55 83.6
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 5.1e-19 97.1 49 91.8
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 5.1e-19 97.1 57 78.9
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 5.1e-19 97.1 57 78.9
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 6.7e-19 96.7 53 84.9
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 1.1e-18 95.9 57 78.9
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.1e-18 95.9 57 78.9
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 1.5e-18 95.5 57 80.7
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.5e-18 95.5 57 77.2
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 2.5e-18 94.7 57 78.9
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 1.3e-17 92.4 57 75.4
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 3.7e-17 90.9 55 76.4
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 4.8e-17 90.5 57 73.7
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 4.8e-17 90.5 57 75.4
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 4.8e-17 90.5 58 74.1
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 1.1e-16 89.4 55 70.9
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 1.8e-16 88.6 57 73.7
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 2.4e-16 88.2 60 73.3
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 4.1e-16 87.4 58 74.1
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 5.3e-16 87.0 51 78.4
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 6.9e-16 86.7 58 74.1
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 6.9e-16 86.7 58 74.1
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 7.7e-15 83.2 57 64.9
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 2.9e-14 81.3 39 92.3
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 9.4e-13 76.3 49 69.4
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 1.6e-12 75.5 39 87.2
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 2.7e-12 74.7 54 61.1
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 3.0e-11 71.2 55 67.3
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 1.4e-08 62.4 48 56.2


User provided reference genes

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