Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 2.2e-57 225.3 108 100.0
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.9e-18 94.4 90 63.3
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.9e-18 94.4 90 63.3
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 5.5e-16 87.8 106 49.1
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 7.2e-16 87.4 96 53.1
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 7.2e-16 87.4 98 51.0
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 9.4e-16 87.0 100 51.0
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.6e-15 86.3 98 52.0
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.1e-15 85.9 98 52.0
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 4.7e-15 84.7 106 50.0
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 8.0e-15 84.0 90 53.3
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.4e-14 83.2 117 47.9
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 8.8e-14 80.5 100 53.0
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.1e-13 80.1 91 56.0
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.4e-13 78.2 72 56.9
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 5.7e-13 77.8 93 50.5
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 5.7e-13 77.8 100 46.0
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 7.4e-13 77.4 104 45.2
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 9.7e-13 77.0 66 63.6
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 9.7e-13 77.0 91 50.5
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-12 76.6 110 44.5
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 2.2e-12 75.9 43 81.4
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 4.8e-12 74.7 90 52.2
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 8.2e-12 73.9 55 67.3
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 8.2e-12 73.9 97 46.4
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 8.2e-12 73.9 98 46.9
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 1.1e-11 73.6 91 51.6
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 1.4e-11 73.2 89 47.2
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 1.8e-11 72.8 102 42.2
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.4e-11 72.4 53 71.7
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 2.4e-11 72.4 71 50.7
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.4e-11 72.4 102 43.1
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 2.4e-11 72.4 100 45.0
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.4e-11 72.4 102 41.2
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 4.1e-11 71.6 55 65.5
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 7.0e-11 70.9 94 50.0
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 7.0e-11 70.9 100 48.0
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.0e-10 69.3 110 40.9
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 2.0e-10 69.3 53 66.0
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 3.5e-10 68.6 44 75.0
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 3.5e-10 68.6 94 43.6
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 7.7e-10 67.4 45 68.9
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.7e-10 67.4 101 43.6
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.0e-09 67.0 90 52.2
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.0e-09 67.0 48 64.6
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.3e-09 66.6 92 42.4
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-09 66.6 101 44.6
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 1.3e-09 66.6 88 47.7
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 1.7e-09 66.2 70 50.0
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.9e-09 65.5 55 54.5
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 2.9e-09 65.5 47 68.1
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.8e-09 65.1 93 43.0
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 3.8e-09 65.1 83 54.2
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 3.8e-09 65.1 94 44.7
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 3.8e-09 65.1 96 49.0
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 8.5e-09 63.9 90 44.4
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 8.5e-09 63.9 94 50.0
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.1e-08 63.5 72 47.2
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.5e-08 63.2 91 41.8
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 1.5e-08 63.2 75 50.7
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 1.9e-08 62.8 91 41.8
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 2.5e-08 62.4 44 68.2
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 3.2e-08 62.0 62 51.6
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 3.2e-08 62.0 76 50.0
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 4.2e-08 61.6 99 41.4
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 5.5e-08 61.2 42 73.8
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 5.5e-08 61.2 53 58.5
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 5.5e-08 61.2 75 50.7
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 9.4e-08 60.5 42 64.3
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 9.4e-08 60.5 59 54.2
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.2e-07 60.1 97 38.1
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.2e-07 60.1 48 58.3
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.2e-07 60.1 117 36.8
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-07 60.1 95 37.9
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-07 60.1 91 42.9
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-07 60.1 95 37.9
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-07 60.1 95 37.9
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-07 60.1 91 42.9
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 1.2e-07 60.1 90 43.3
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 1.6e-07 59.7 62 56.5
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 1.6e-07 59.7 92 44.6
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 2.1e-07 59.3 82 47.6
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 3.6e-07 58.5 100 38.0
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 3.6e-07 58.5 89 47.2
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 3.6e-07 58.5 93 40.9
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.7e-07 58.2 59 52.5
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 4.7e-07 58.2 82 45.1
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 4.7e-07 58.2 98 41.8
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.7e-07 58.2 95 36.8
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 4.7e-07 58.2 69 44.9
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 4.7e-07 58.2 55 54.5
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.1e-07 57.8 95 36.8
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.4e-06 56.6 96 41.7
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.8e-06 56.2 42 57.1
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 1.8e-06 56.2 68 47.1
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.3e-06 55.8 37 67.6
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 2.3e-06 55.8 83 45.8
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 2.3e-06 55.8 97 38.1
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 4.0e-06 55.1 64 50.0
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 4.0e-06 55.1 47 55.3
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 4.0e-06 55.1 40 65.0
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 5.2e-06 54.7 99 37.4
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 8.8e-06 53.9 41 58.5
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 8.8e-06 53.9 41 58.5
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.8e-06 53.9 88 43.2


User provided reference genes

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