Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 2.6e-49 198.4 98 100.0
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 2.2e-24 115.5 93 66.7
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 6.7e-21 104.0 93 60.2
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 1.6e-17 92.8 95 48.4
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 5.9e-17 90.9 96 53.1
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 3.8e-16 88.2 94 54.3
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 3.8e-16 88.2 84 52.4
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 5.5e-15 84.3 94 50.0
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 7.2e-15 84.0 95 53.7
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 1.2e-14 83.2 91 48.4
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 2.1e-14 82.4 94 52.1
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 4.7e-14 81.3 81 53.1
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 4.7e-14 81.3 95 53.7
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 8.0e-14 80.5 98 46.9
Solyc10g150149.1 Solanum lycopersicum HOM05D007569 ORTHO05D009268 3.0e-13 78.6 90 48.9
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 5.2e-13 77.8 97 50.5
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 6.8e-13 77.4 93 48.4
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 1.5e-12 76.3 93 46.2
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 2.6e-12 75.5 81 45.7
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 3.4e-12 75.1 86 50.0
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 5.7e-12 74.3 92 47.8
Oeu060096.1 Olea europaea HOM05D007569 ORTHO05D009268 7.5e-12 73.9 77 54.5
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 9.8e-12 73.6 97 47.4
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 9.8e-12 73.6 87 49.4
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 9.8e-12 73.6 99 46.5
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.7e-11 72.8 96 42.7
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 2.2e-11 72.4 93 45.2
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 3.7e-11 71.6 99 49.5
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 3.7e-11 71.6 97 52.6
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 2.4e-10 68.9 93 43.0
Aqoxy4G03229 Aquilegia oxysepala HOM05D007569 ORTHO05D009268 4.1e-10 68.2 88 46.6
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 5.4e-10 67.8 95 45.3
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 9.1e-10 67.0 93 49.5
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 1.6e-09 66.2 101 41.6
Gorai.013G026900 Gossypium raimondii HOM05D007569 ORTHO05D009268 2.0e-09 65.9 81 40.7
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 2.0e-09 65.9 98 41.8
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 3.5e-09 65.1 89 44.9
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 1.3e-08 63.2 74 50.0
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 2.9e-08 62.0 94 39.4
Oeu059987.1 Olea europaea HOM05D007569 ORTHO05D009268 3.8e-08 61.6 62 54.8
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 5.0e-08 61.2 93 46.2
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 5.0e-08 61.2 94 39.4
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 5.0e-08 61.2 94 47.9
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 6.5e-08 60.8 95 44.2
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 6.5e-08 60.8 95 44.2
Nn2g13029 Nelumbo nucifera HOM05D007569 ORTHO05D009268 6.5e-08 60.8 95 41.1
FAN05G3967 Fragaria x ananassa HOM05D007569 ORTHO05D009268 1.1e-07 60.1 96 41.7
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 2.5e-07 58.9 85 48.2
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 2.5e-07 58.9 90 41.1
Sabra06G0102400 Salix brachista HOM05D007569 ORTHO05D009268 2.5e-07 58.9 92 37.0
Gohir.D01G205200 Gossypium hirsutum HOM05D007569 ORTHO05D009268 4.2e-07 58.2 94 38.3
Nn2g10705 Nelumbo nucifera HOM05D007569 ORTHO05D009268 4.2e-07 58.2 80 45.0
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 5.5e-07 57.8 70 44.3
Glyma.13G138100 Glycine max HOM05D007569 ORTHO05D009268 7.2e-07 57.4 99 38.4
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 9.4e-07 57.0 83 42.2
Gohir.D13G023800 Gossypium hirsutum HOM05D007569 ORTHO05D009268 9.4e-07 57.0 70 44.3
DCAR_020844 Daucus carota HOM05D007569 ORTHO05D009268 1.2e-06 56.6 71 39.4
Lsat_1_v5_gn_1_54200 Lactuca sativa HOM05D007569 ORTHO05D009268 1.6e-06 56.2 57 52.6
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 1.6e-06 56.2 47 55.3
Solyc09g007480.3 Solanum lycopersicum HOM05D007569 ORTHO05D009268 1.6e-06 56.2 93 38.7
AL6G12400 Arabidopsis lyrata HOM05D007569 ORTHO05D009268 2.1e-06 55.8 64 42.2
EL10Ac7g16512 Beta vulgaris HOM05D007569 ORTHO05D009268 2.1e-06 55.8 75 40.0
MD12G1122100 Malus domestica HOM05D007569 ORTHO05D009268 2.1e-06 55.8 63 47.6
ECA248G1179 Erigeron canadensis HOM05D007569 ORTHO05D009268 2.7e-06 55.5 59 45.8
BcaB05g21850 Brassica carinata HOM05D007569 ORTHO05D009268 3.6e-06 55.1 66 37.9
BcaC03g13030 Brassica carinata HOM05D007569 ORTHO05D009268 4.7e-06 54.7 66 43.9
C02p00800 Brassica napus HOM05D004310 ORTHO05D009268 4.7e-06 54.7 66 43.9
Thhalv10015759m.g Eutrema salsugineum HOM05D007569 ORTHO05D009268 4.7e-06 54.7 68 38.2
BraA02t04745Z Brassica rapa HOM05D007569 ORTHO05D009268 8.0e-06 53.9 83 38.6
Manes.09G078021 Manihot esculenta HOM05D007569 ORTHO05D009268 8.0e-06 53.9 92 40.2
Sp6g39590 Schrenkiella parvula HOM05D007569 ORTHO05D009268 8.0e-06 53.9 68 38.2


User provided reference genes

Program Settings