Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-83 312.4 184 100.0
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-76 288.9 184 92.9
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-76 288.9 184 92.9
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-76 288.9 184 92.9
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-74 282.3 184 91.3
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.9e-74 280.4 186 90.3
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-72 276.6 184 89.1
CSS0038071 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-50 202.6 185 73.0
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.6e-31 138.7 66 97.0
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-30 137.5 66 97.0
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-30 136.3 66 95.5
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-30 134.8 106 66.0
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-27 125.6 120 52.5
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-26 124.0 120 52.5
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-26 124.0 122 51.6
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-26 124.0 120 52.5
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-26 124.0 122 51.6
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-26 123.6 122 51.6
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-26 123.6 122 51.6
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 50.4
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 50.4
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 122 51.6
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-26 123.2 127 50.4
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.4e-26 122.5 147 44.9
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.5e-26 122.1 127 49.6
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.9e-26 121.7 127 49.6
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.9e-26 121.7 127 49.6
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.9e-26 121.7 127 49.6
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.9e-26 121.7 127 49.6
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.9e-26 121.7 127 49.6
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-26 121.3 120 50.8
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-26 121.3 127 49.6
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-25 120.9 127 49.6
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-25 120.6 122 50.0
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-25 120.6 122 50.0
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-25 120.6 122 50.0
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-21 107.5 136 41.2
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.3e-20 104.0 136 39.7
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.3e-20 101.7 136 39.7
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 1.2e-18 97.4 154 35.7
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.2e-18 97.4 126 40.5
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 1.5e-18 97.1 132 41.7
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 3.4e-18 95.9 126 43.7
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.5e-18 95.5 154 34.4
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.5e-18 95.5 154 34.4
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.9e-18 95.1 154 35.1
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.7e-18 94.7 154 33.8
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.7e-18 94.7 136 39.0
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.7e-18 94.7 153 35.3
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 1.0e-17 94.4 132 40.9
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.0e-17 94.4 128 42.2
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.7e-17 93.6 154 34.4
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 1.9e-16 90.1 127 38.6
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.2e-16 89.4 139 33.8
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.2e-16 88.2 154 32.5
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-16 87.8 155 32.3
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-16 87.8 155 32.3
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-16 87.8 155 32.3
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-16 87.8 155 32.3
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-16 87.8 155 32.3
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 2.1e-15 86.7 105 42.9
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-15 86.3 154 33.1
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.9e-15 84.7 139 33.8
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-14 83.2 131 39.7
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.8e-14 81.3 132 37.1
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 9.7e-13 77.8 115 36.5
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.3e-12 77.4 150 30.0
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 6.3e-12 75.1 135 29.6
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 1.1e-11 74.3 118 39.0
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 7.0e-11 71.6 107 37.4
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-10 70.9 79 46.8
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 1.2e-10 70.9 139 32.4
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.5e-10 68.9 107 38.3
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.0e-09 67.8 148 29.1
FvH4_1g28940 Fragaria vesca HOM05D005012 ORTHO05D005886 1.3e-09 67.4 118 33.1
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.7e-09 67.0 149 30.2
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 2.9e-09 66.2 128 31.2
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.9e-09 66.2 129 31.0
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 5.0e-09 65.5 146 30.8
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-09 64.7 54 55.6
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-08 64.3 54 53.7
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-08 63.2 147 29.9
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.2e-08 62.4 51 52.9
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.2e-08 61.6 54 53.7
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.2e-08 61.6 50 56.0
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.1e-07 60.1 96 36.5
CSS0022576 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.6e-07 59.3 51 54.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 4.7e-07 58.9 127 26.8
FAN26G1690 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-07 58.9 53 50.9
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 6.1e-07 58.5 132 27.3
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 6.1e-07 58.5 72 43.1
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 6.1e-07 58.5 45 48.9
CSS0013518 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-06 57.0 50 54.0
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.8e-06 57.0 115 30.4
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.3e-06 56.6 127 26.8
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-06 56.6 45 53.3
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-06 56.2 128 27.3
FvH4_6g21851 Fragaria vesca HOM05D005012 ORTHO05D005886 3.0e-06 56.2 71 38.0
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.0e-06 56.2 141 29.1
TAR626G0226 Trochodendron aralioides HOM05D009698 ORTHO05D000385 4.0e-06 55.8 99 34.3
CSS0036042 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.2e-06 55.5 37 62.2
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 5.2e-06 55.5 66 37.9
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.2e-06 55.5 140 28.6
FAN12G0378 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.7e-06 55.1 66 39.4
Rhsim01G0081500 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.7e-06 55.1 57 45.6
Ah.01g006000 Amaranthus hybridus HOM05D008455 ORTHO05D009597 8.8e-06 54.7 116 25.9
Rhsim07G0167600 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.8e-06 54.7 55 40.0


User provided reference genes

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